RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSTUG00000032751	Gene ID	115158169	Accession	-
Symbol		Alias	-	Full Name	40S ribosomal protein S27-like
Status	Confidence	Length	2928 bases	Strand	Minus strand
Position	22 : 14558001 - 14560928	RNA binding domain	Ribosomal_S27e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSTUP00000074714	Ribosomal_S27e	PF01667	2e-23	1
ENSSTUP00000074706	Ribosomal_S27e	PF01667	2.1e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSTUT00000079387	294	97aa	ENSSTUP00000074706
-	ENSSTUT00000079396	294	97aa	ENSSTUP00000074714

Gene Model

Click here to download ENSSTUG00000032751's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSTUG00000032751's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000014325	91.6667	84.5238	salmo_trutta	ENSSTUP00000074714	79.3814	73.1959
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000084477	79.7619	69.0476	salmo_trutta	ENSSTUP00000074714	69.0722	59.7938
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000108623	50	44.0299	salmo_trutta	ENSSTUP00000074714	69.0722	60.8247
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000094046	50.3876	45.7364	salmo_trutta	ENSSTUP00000074714	67.0103	60.8247
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000083749	64.1509	56.6038	salmo_trutta	ENSSTUP00000074714	70.1031	61.8557

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	98.9691	96.9072	oncorhynchus_kisutch	ENSOKIP00005036402	91.4286	89.5238
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	81.4433	77.3196	salmo_salar	ENSSSAP00000180391	85.8696	81.5217
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	76.2887	62.8866	tursiops_truncatus	ENSTTRP00000003545	66.6667	54.955
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	choloepus_hoffmanni	ENSCHOP00000005956	63.964	54.0541
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	physeter_catodon	ENSPCTP00005021225	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	pan_paniscus	ENSPPAP00000008234	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	callithrix_jacchus	ENSCJAP00000091636	71.7172	60.6061
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	38.1443	30.9278	erinaceus_europaeus	ENSEEUP00000002234	63.7931	51.7241
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	70.1031	59.7938	echinops_telfairi	ENSETEP00000001037	83.9506	71.6049
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	panthera_pardus	ENSPPRP00000002940	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	panthera_leo	ENSPLOP00000020549	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	52.5773	43.299	anas_platyrhynchos_platyrhynchos	ENSAPLP00000026123	26.5625	21.875
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	72.1649	64.9485	astatotilapia_calliptera	ENSACLP00000003086	76.9231	69.2308
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	48.4536	37.1134	capra_hircus	ENSCHIP00000025864	52.2222	40
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	45.3608	40.2062	ursus_americanus	ENSUAMP00000007452	65.6716	58.209
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	52.5773	47.4227	ursus_americanus	ENSUAMP00000031859	47.6636	42.9907
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	75.2577	62.8866	vicugna_pacos	ENSVPAP00000005078	66.3636	55.4545
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	pongo_abelii	ENSPPYP00000034838	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	72.1649	62.8866	sorex_araneus	ENSSARP00000007157	73.6842	64.2105
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	72.1649	60.8247	otolemur_garnettii	ENSOGAP00000002245	86.4198	72.8395
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	cervus_hanglu_yarkandensis	ENSCHYP00000011018	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	74.2268	60.8247	pteropus_vampyrus	ENSPVAP00000008805	65.4545	53.6364
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	39.1753	31.9588	bos_mutus	ENSBMUP00000031904	49.3507	40.2597
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	felis_catus	ENSFCAP00000051443	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	microcebus_murinus	ENSMICP00000006469	68.932	58.2524
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	45.3608	35.0515	canis_lupus_dingo	ENSCAFP00020011768	24.7191	19.1011
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	81.4433	75.2577	hucho_hucho	ENSHHUP00000091209	85.8696	79.3478
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	neovison_vison	ENSNVIP00000024208	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	57.732	40.2062	neovison_vison	ENSNVIP00000031812	69.1358	48.1481
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	pan_troglodytes	ENSPTRP00000092483	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	camelus_dromedarius	ENSCDRP00005005306	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	60.8247	tupaia_belangeri	ENSTBEP00000007507	63.3929	52.6786
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	72.1649	64.9485	maylandia_zebra	ENSMZEP00005012323	76.9231	69.2308
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	monodon_monoceros	ENSMMNP00015013780	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	78.3505	64.9485	acanthochromis_polyacanthus	ENSAPOP00000033097	56.2963	46.6667
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	78.3505	64.9485	acanthochromis_polyacanthus	ENSAPOP00000033659	56.2963	46.6667
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	74.2268	68.0412	dicentrarchus_labrax	ENSDLAP00005072579	69.2308	63.4615
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	62.8866	52.5773	struthio_camelus_australis	ENSSCUP00000021280	78.2051	65.3846
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	49.4845	37.1134	rattus_norvegicus	ENSRNOP00000033162	16.4948	12.3711
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	38.1443	31.9588	sinocyclocheilus_grahami	ENSSGRP00000078826	72.549	60.7843
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	aotus_nancymaae	ENSANAP00000020915	71	60
ENSSTUG00000032751	salmo_trutta	ENSSTUP00000074714	73.1959	61.8557	prolemur_simus	ENSPSMP00000005595	71	60

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression