RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSTOG00000002108	Gene ID	101976436	Accession	-
Symbol		Alias	-	Full Name	Y-box-binding protein 3
Status	Confidence	Length	18329 bases	Strand	Plus strand
Position	JH393968.1 : 26407 - 44735	RNA binding domain	CSD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSTOP00000001876	CSD	PF00313	3.2e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSTOT00000002106	939	312aa	ENSSTOP00000001876

Gene Model

Click here to download ENSSTOG00000002108's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSTOG00000002108's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000007729	55.1095	46.7153	ictidomys_tridecemlineatus	ENSSTOP00000001876	48.3974	41.0256
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000000102	60.6897	55.8621	ictidomys_tridecemlineatus	ENSSTOP00000001876	56.4103	51.9231
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000031278	41.3979	29.5699	ictidomys_tridecemlineatus	ENSSTOP00000001876	24.6795	17.6282
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000003875	39.0476	27.1429	ictidomys_tridecemlineatus	ENSSTOP00000001876	26.2821	18.2692
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000002400	29.927	21.1679	ictidomys_tridecemlineatus	ENSSTOP00000001876	26.2821	18.5897
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000025854	53.3123	47.6341	ictidomys_tridecemlineatus	ENSSTOP00000001876	54.1667	48.3974
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000025837	74.7059	72.0588	ictidomys_tridecemlineatus	ENSSTOP00000001876	81.4103	78.5256

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	49.0385	45.5128	ornithorhynchus_anatinus	ENSOANP00000037887	72.1698	66.9811
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	77.2436	74.0385	sarcophilus_harrisii	ENSSHAP00000003709	68.4659	65.625
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	48.3974	45.5128	notamacropus_eugenii	ENSMEUP00000002291	72.9469	68.599
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	59.9359	58.6538	dasypus_novemcinctus	ENSDNOP00000000368	83.4821	81.6964
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	86.5385	83.0128	mandrillus_leucophaeus	ENSMLEP00000019028	74.1758	71.1538
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	75	74.0385	vulpes_vulpes	ENSVVUP00000006471	87.3134	86.194
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	69.8718	68.2692	tursiops_truncatus	ENSTTRP00000007616	82.5758	80.6818
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	68.9103	66.0256	physeter_catodon	ENSPCTP00005030526	78.1818	74.9091
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	61.859	59.6154	delphinapterus_leucas	ENSDLEP00000000783	75.9843	73.2283
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	68.2692	66.3462	balaenoptera_musculus	ENSBMSP00010008928	73.1959	71.134
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	82.0513	79.4872	capra_hircus	ENSCHIP00000007360	68.0851	65.9574
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	82.0513	79.1667	bos_taurus	ENSBTAP00000058871	54.0084	52.1097
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	84.2949	81.7308	dipodomys_ordii	ENSDORP00000008549	74.0845	71.831
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	75.9615	73.7179	monodelphis_domestica	ENSMODP00000022758	76.699	74.4337
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	79.1667	75.9615	bos_grunniens	ENSBGRP00000035192	70.1705	67.3295
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	82.0513	81.0897	ursus_maritimus	ENSUMAP00000022027	84.7682	83.7748
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	78.5256	75	vombatus_ursinus	ENSVURP00010009606	70	66.8571
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	79.1667	75.9615	bos_indicus_hybrid	ENSBIXP00005005485	70.1705	67.3295
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	67.3077	64.4231	phascolarctos_cinereus	ENSPCIP00000040935	82.0312	78.5156
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	84.9359	82.6923	saimiri_boliviensis_boliviensis	ENSSBOP00000028646	69.7368	67.8947
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	66.3462	64.7436	phocoena_sinus	ENSPSNP00000008817	80.2326	78.2946
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	78.8462	76.9231	bison_bison_bison	ENSBBBP00000026658	66.3073	64.69
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	83.0128	81.4103	carlito_syrichta	ENSTSYP00000025715	76.4012	74.9263
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	77.8846	75.641	monodon_monoceros	ENSMMNP00015029476	79.6721	77.3771
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	80.1282	75.9615	cervus_hanglu_yarkandensis	ENSCHYP00000031869	67.9348	64.4022
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	85.8974	81.4103	bos_mutus	ENSBMUP00000036200	69.6104	65.974
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	82.3718	77.8846	rhinolophus_ferrumequinum	ENSRFEP00010006972	76.0355	71.8935
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	79.1667	75.641	moschus_moschiferus	ENSMMSP00000031854	69.382	66.2921
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	84.2949	83.3333	panthera_tigris_altaica	ENSPTIP00000002248	74.7159	73.8636
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	75.3205	74.0385	myotis_lucifugus	ENSMLUP00000006825	87.6866	86.194
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	76.6026	71.7949	catagonus_wagneri	ENSCWAP00000014649	76.6026	71.7949
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	31.4103	25.9615	caenorhabditis_elegans	F33A8.3.1	47.1154	38.9423
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	39.1026	30.4487	ciona_intestinalis	ENSCINP00000021107	38.125	29.6875
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	44.8718	33.3333	oryzias_latipes	ENSORLP00000007879	34.1463	25.3659
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	73.3974	68.9103	chrysemys_picta_bellii	ENSCPBP00000019607	64.6893	60.7345
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	53.5256	50.641	crocodylus_porosus	ENSCPRP00005001430	59.8566	56.6308
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	39.1026	35.5769	sphenodon_punctatus	ENSSPUP00000012852	57.5472	52.3585
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	51.2821	46.7949	xenopus_tropicalis	ENSXETP00000103639	64.5161	58.871
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	46.1538	42.9487	anas_platyrhynchos_platyrhynchos	ENSAPLP00000002636	45.5696	42.4051
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	55.1282	52.5641	gallus_gallus	ENSGALP00010035452	59.1065	56.3574
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	53.8462	51.6026	meleagris_gallopavo	ENSMGAP00000015044	65.1163	62.4031
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	52.5641	47.7564	parus_major	ENSPMJP00000012505	54.8495	49.8328
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	54.8077	51.2821	serinus_canaria	ENSSCAP00000011617	64.2857	60.1504
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	54.4872	53.5256	pelodiscus_sinensis	ENSPSIP00000010326	79.4393	78.0374
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	19.5513	16.6667	labrus_bergylta	ENSLBEP00000035220	66.3043	56.5217
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	48.3974	42.9487	leptobrachium_leishanense	ENSLLEP00000048602	56.5543	50.1873
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	46.1538	41.9872	geospiza_fortis	ENSGFOP00000010446	56.917	51.7787
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	65.0641	58.9744	gopherus_evgoodei	ENSGEVP00005021840	64.6497	58.5987
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	32.6923	24.0385	cyprinus_carpio_carpio	ENSCCRP00000124632	37.0909	27.2727
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	44.5513	41.0256	taeniopygia_guttata	ENSTGUP00000012410	74.7312	68.8172
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	57.6923	54.8077	terrapene_carolina_triunguis	ENSTMTP00000008466	62.5	59.375
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	54.1667	50.3205	ficedula_albicollis	ENSFALP00000022802	68.1452	63.3064
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	23.0769	21.1538	anabas_testudineus	ENSATEP00000028175	50.3497	46.1538
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	63.4615	57.3718	chelonoidis_abingdonii	ENSCABP00000008417	52.6596	47.6064
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	40.7051	31.7308	ciona_savignyi	ENSCSAVP00000005111	38.8379	30.2752
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	41.9872	31.7308	amphilophus_citrinellus	ENSACIP00000019122	41.4557	31.3291
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	52.5641	49.359	anser_brachyrhynchus	ENSABRP00000010965	43.8503	41.1765
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	19.8718	18.5897	denticeps_clupeoides	ENSDCDP00000012971	67.3913	63.0435
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	56.0897	51.9231	strigops_habroptila	ENSSHBP00005014217	58.3333	54
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	56.4103	52.8846	aquila_chrysaetos_chrysaetos	ENSACCP00020010781	58.8629	55.1839
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	55.4487	53.2051	struthio_camelus_australis	ENSSCUP00000011702	68.1102	65.3543
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	54.4872	51.6026	coturnix_japonica	ENSCJPP00005021448	59.4406	56.2937
ENSSTOG00000002108	ictidomys_tridecemlineatus	ENSSTOP00000001876	45.5128	34.9359	stegastes_partitus	ENSSPAP00000021890	43.2927	33.2317

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression