RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSSSUG00005018495	Gene ID		Accession	-
Symbol		Alias	-	Full Name	alanyl-tRNA synthetase 1
Status	Confidence	Length	23750 bases	Strand	Minus strand
Position	16 : 12116213 - 12139962	RNA binding domain	tRNA-synt_2c , tRNA_SAD , DHHA1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSUP00005028646	tRNA-synt_2c	PF01411	5.2e-226	1
ENSSSUP00005028646	tRNA_SAD	PF07973	1e-17	2
ENSSSUP00005028646	DHHA1	PF02272	2.6e-19	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSSUT00005032697	3814	968aa	ENSSSUP00005028646

Gene Model

Click here to download ENSSSUG00005018495's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSUG00005018495's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSUG00005018495

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSUG00005018495

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression