RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00070029035 | Gene ID |
100518066 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
RNA polymerase I subunit A |
Status |
Confidence |
Length |
79656 bases |
Strand |
Plus strand |
Position |
3 : 57400777 - 57480432 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00070049503 |
RNA_pol_Rpb1_4 |
PF05000 |
3.5e-25 |
1 |
ENSSSCP00070049503 |
RNA_pol_Rpb1_1 |
PF04997 |
7.5e-22 |
2 |
ENSSSCP00070049503 |
RNA_pol_Rpb1_5 |
PF04998 |
2.7e-103 |
3 |
ENSSSCP00070049503 |
RNA_pol_Rpb1_2 |
PF00623 |
4.4e-70 |
4 |
ENSSSCP00070049503 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-36 |
5 |
ENSSSCP00070049504 |
RNA_pol_Rpb1_4 |
PF05000 |
3.5e-25 |
1 |
ENSSSCP00070049504 |
RNA_pol_Rpb1_1 |
PF04997 |
7.5e-22 |
2 |
ENSSSCP00070049504 |
RNA_pol_Rpb1_5 |
PF04998 |
2.7e-103 |
3 |
ENSSSCP00070049504 |
RNA_pol_Rpb1_2 |
PF00623 |
4.4e-70 |
4 |
ENSSSCP00070049504 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-36 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00070058229 |
5487 |
1715aa |
ENSSSCP00070049503 |
- |
ENSSSCT00070058230 |
6227 |
1715aa |
ENSSSCP00070049504 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070002709 | 48.1295 | 30.1439 | sus_scrofa_usmarc | ENSSSCP00070049504 | 39.0087 | 24.4315 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070036079 | 35.7436 | 22 | sus_scrofa_usmarc | ENSSSCP00070049504 | 40.6414 | 25.0146 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.9417 | sus_scrofa | ENSSSCP00000008782 | 99.6512 | 99.6512 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 95.9767 | 92.5947 | equus_caballus | ENSECAP00000008753 | 95.6977 | 92.3256 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 95.9767 | 92.5947 | equus_caballus | ENSECAP00000040001 | 94.7611 | 91.422 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 95.9767 | 92.5947 | equus_caballus | ENSECAP00000063110 | 93.1522 | 89.8698 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060029230 | 99.7093 | 99.7093 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.9417 | sus_scrofa_meishan | ENSSSCP00040000216 | 99.5933 | 99.5933 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.9417 | sus_scrofa_berkshire | ENSSSCP00065023495 | 99.6512 | 99.6512 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050012223 | 99.7093 | 99.7093 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.9417 | sus_scrofa_landrace | ENSSSCP00045033288 | 99.5933 | 99.5933 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 94.519 | 90.8455 | ovis_aries_rambouillet | ENSOARP00020004828 | 96.2589 | 92.5178 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.9417 | sus_scrofa_rongchang | ENSSSCP00030005804 | 99.5933 | 99.5933 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.9417 | sus_scrofa_pietrain | ENSSSCP00055031152 | 99.5933 | 99.5933 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.8834 | 99.8251 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.593 | 99.5349 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 96.3265 | 96.2682 | sus_scrofa_wuzhishan | ENSSSCP00005020992 | 98.863 | 98.8031 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015018454 | 99.7093 | 99.7093 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 96.1516 | 92.4198 | bos_taurus | ENSBTAP00000008496 | 96.0396 | 92.3122 |
ENSSSCG00070029035 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.9417 | 99.8834 | sus_scrofa_largewhite | ENSSSCP00025047405 | 99.6512 | 99.593 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |