Description

Ensembl ID ENSSSCG00070029035 Gene ID 100518066 Accession -
Symbol Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 79656 bases Strand Plus strand
Position 3 : 57400777 - 57480432 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00070049503 RNA_pol_Rpb1_4 PF05000 3.5e-25 1
ENSSSCP00070049503 RNA_pol_Rpb1_1 PF04997 7.5e-22 2
ENSSSCP00070049503 RNA_pol_Rpb1_5 PF04998 2.7e-103 3
ENSSSCP00070049503 RNA_pol_Rpb1_2 PF00623 4.4e-70 4
ENSSSCP00070049503 RNA_pol_Rpb1_3 PF04983 3.3e-36 5
ENSSSCP00070049504 RNA_pol_Rpb1_4 PF05000 3.5e-25 1
ENSSSCP00070049504 RNA_pol_Rpb1_1 PF04997 7.5e-22 2
ENSSSCP00070049504 RNA_pol_Rpb1_5 PF04998 2.7e-103 3
ENSSSCP00070049504 RNA_pol_Rpb1_2 PF00623 4.4e-70 4
ENSSSCP00070049504 RNA_pol_Rpb1_3 PF04983 3.3e-36 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00070058229 5487 1715aa ENSSSCP00070049503
- ENSSSCT00070058230 6227 1715aa ENSSSCP00070049504

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007000270948.129530.1439sus_scrofa_usmarcENSSSCP0007004950439.008724.4315
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007003607935.743622sus_scrofa_usmarcENSSSCP0007004950440.641425.0146

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.9417sus_scrofaENSSSCP0000000878299.651299.6512
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950495.976792.5947equus_caballusENSECAP0000000875395.697792.3256
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950495.976792.5947equus_caballusENSECAP0000004000194.761191.422
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950495.976792.5947equus_caballusENSECAP0000006311093.152289.8698
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP00070049504100100sus_scrofa_jinhuaENSSSCP0006002923099.709399.7093
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.9417sus_scrofa_meishanENSSSCP0004000021699.593399.5933
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.9417sus_scrofa_berkshireENSSSCP0006502349599.651299.6512
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP00070049504100100sus_scrofa_bameiENSSSCP0005001222399.709399.7093
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.9417sus_scrofa_landraceENSSSCP0004503328899.593399.5933
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950494.51990.8455ovis_aries_rambouilletENSOARP0002000482896.258992.5178
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.9417sus_scrofa_rongchangENSSSCP0003000580499.593399.5933
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.9417sus_scrofa_pietrainENSSSCP0005503115299.593399.5933
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.883499.8251sus_scrofa_hampshireENSSSCP0003500014399.59399.5349
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950496.326596.2682sus_scrofa_wuzhishanENSSSCP0000502099298.86398.8031
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP00070049504100100sus_scrofa_tibetanENSSSCP0001501845499.709399.7093
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950496.151692.4198bos_taurusENSBTAP0000000849696.039692.3122
ENSSSCG00070029035sus_scrofa_usmarcENSSSCP0007004950499.941799.8834sus_scrofa_largewhiteENSSSCP0002504740599.651299.593

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression