Description

Ensembl ID ENSSSCG00070028761 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 355927 bases Strand Plus strand
Position 6 : 87977228 - 88333154 RNA binding domain W2 , MIF4G , MA3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00070049165 W2 PF02020 2.1e-18 1
ENSSSCP00070049165 MIF4G PF02854 3e-68 2
ENSSSCP00070049165 MA3 PF02847 3e-19 3
ENSSSCP00070049165 MA3 PF02847 3e-19 4
ENSSSCP00070049164 W2 PF02020 2.2e-18 1
ENSSSCP00070049164 MIF4G PF02854 3.2e-68 2
ENSSSCP00070049164 MA3 PF02847 3.3e-19 3
ENSSSCP00070049164 MA3 PF02847 3.3e-19 4
ENSSSCP00070049158 W2 PF02020 2.3e-18 1
ENSSSCP00070049158 MIF4G PF02854 3.2e-68 2
ENSSSCP00070049158 MA3 PF02847 1.6e-28 3
ENSSSCP00070049152 W2 PF02020 2.5e-18 1
ENSSSCP00070049152 MIF4G PF02854 3.7e-68 2
ENSSSCP00070049152 MA3 PF02847 1.6e-28 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00070057821 5310 1769aa ENSSSCP00070049152
- ENSSSCT00070057827 4974 1657aa ENSSSCP00070049158
- ENSSSCT00070057833 4815 1604aa ENSSSCP00070049164
- ENSSSCT00070057837 4689 1562aa ENSSSCP00070049165

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007001884944.78426.765sus_scrofa_usmarcENSSSCP0007004915224.024914.3584
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007003109062.360249.1925sus_scrofa_usmarcENSSSCP0007004915256.755244.7711

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915293.329693.2165sus_scrofaENSSSCP0000004248499.577899.4572
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915291.746789.9943equus_caballusENSECAP0000003216492.902191.1276
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.163989.8248sus_scrofa_jinhuaENSSSCP0006004220597.137696.7722
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.163989.8248sus_scrofa_meishanENSSSCP0004003255296.142395.7806
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915296.777896.4952sus_scrofa_berkshireENSSSCP0006502214195.005594.7281
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.107489.7682sus_scrofa_bameiENSSSCP0005004846197.076796.7113
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915293.27393.16sus_scrofa_landraceENSSSCP0004504713699.517599.3969
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915296.664894.7993ovis_aries_rambouilletENSOARP0002002871796.229694.3725
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.163989.8248sus_scrofa_rongchangENSSSCP0003003321596.142395.7806
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915297.96597.965sus_scrofa_pietrainENSSSCP0005502338899.884799.8847
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.107489.7682sus_scrofa_hampshireENSSSCP0003504897297.076796.7113
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915293.781893.7818sus_scrofa_wuzhishanENSSSCP0000501903596.341596.3415
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.163989.7682sus_scrofa_tibetanENSSSCP0001502254896.142395.7203
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915286.489584.2284bos_taurusENSBTAP0000006488091.1888.7962
ENSSSCG00070028761sus_scrofa_usmarcENSSSCP0007004915290.050989.7117sus_scrofa_largewhiteENSSSCP0002501025697.015896.6504

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression