RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00070028761 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
355927 bases |
Strand |
Plus strand |
Position |
6 : 87977228 - 88333154 |
RNA binding domain |
W2 , MIF4G , MA3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00070049165 |
W2 |
PF02020 |
2.1e-18 |
1 |
ENSSSCP00070049165 |
MIF4G |
PF02854 |
3e-68 |
2 |
ENSSSCP00070049165 |
MA3 |
PF02847 |
3e-19 |
3 |
ENSSSCP00070049165 |
MA3 |
PF02847 |
3e-19 |
4 |
ENSSSCP00070049164 |
W2 |
PF02020 |
2.2e-18 |
1 |
ENSSSCP00070049164 |
MIF4G |
PF02854 |
3.2e-68 |
2 |
ENSSSCP00070049164 |
MA3 |
PF02847 |
3.3e-19 |
3 |
ENSSSCP00070049164 |
MA3 |
PF02847 |
3.3e-19 |
4 |
ENSSSCP00070049158 |
W2 |
PF02020 |
2.3e-18 |
1 |
ENSSSCP00070049158 |
MIF4G |
PF02854 |
3.2e-68 |
2 |
ENSSSCP00070049158 |
MA3 |
PF02847 |
1.6e-28 |
3 |
ENSSSCP00070049152 |
W2 |
PF02020 |
2.5e-18 |
1 |
ENSSSCP00070049152 |
MIF4G |
PF02854 |
3.7e-68 |
2 |
ENSSSCP00070049152 |
MA3 |
PF02847 |
1.6e-28 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00070057821 |
5310 |
1769aa |
ENSSSCP00070049152 |
- |
ENSSSCT00070057827 |
4974 |
1657aa |
ENSSSCP00070049158 |
- |
ENSSSCT00070057833 |
4815 |
1604aa |
ENSSSCP00070049164 |
- |
ENSSSCT00070057837 |
4689 |
1562aa |
ENSSSCP00070049165 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070018849 | 44.784 | 26.765 | sus_scrofa_usmarc | ENSSSCP00070049152 | 24.0249 | 14.3584 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070031090 | 62.3602 | 49.1925 | sus_scrofa_usmarc | ENSSSCP00070049152 | 56.7552 | 44.7711 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 93.3296 | 93.2165 | sus_scrofa | ENSSSCP00000042484 | 99.5778 | 99.4572 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 91.7467 | 89.9943 | equus_caballus | ENSECAP00000032164 | 92.9021 | 91.1276 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.1639 | 89.8248 | sus_scrofa_jinhua | ENSSSCP00060042205 | 97.1376 | 96.7722 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.1639 | 89.8248 | sus_scrofa_meishan | ENSSSCP00040032552 | 96.1423 | 95.7806 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 96.7778 | 96.4952 | sus_scrofa_berkshire | ENSSSCP00065022141 | 95.0055 | 94.7281 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.1074 | 89.7682 | sus_scrofa_bamei | ENSSSCP00050048461 | 97.0767 | 96.7113 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 93.273 | 93.16 | sus_scrofa_landrace | ENSSSCP00045047136 | 99.5175 | 99.3969 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 96.6648 | 94.7993 | ovis_aries_rambouillet | ENSOARP00020028717 | 96.2296 | 94.3725 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.1639 | 89.8248 | sus_scrofa_rongchang | ENSSSCP00030033215 | 96.1423 | 95.7806 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 97.965 | 97.965 | sus_scrofa_pietrain | ENSSSCP00055023388 | 99.8847 | 99.8847 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.1074 | 89.7682 | sus_scrofa_hampshire | ENSSSCP00035048972 | 97.0767 | 96.7113 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 93.7818 | 93.7818 | sus_scrofa_wuzhishan | ENSSSCP00005019035 | 96.3415 | 96.3415 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.1639 | 89.7682 | sus_scrofa_tibetan | ENSSSCP00015022548 | 96.1423 | 95.7203 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 86.4895 | 84.2284 | bos_taurus | ENSBTAP00000064880 | 91.18 | 88.7962 |
ENSSSCG00070028761 | sus_scrofa_usmarc | ENSSSCP00070049152 | 90.0509 | 89.7117 | sus_scrofa_largewhite | ENSSSCP00025010256 | 97.0158 | 96.6504 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |