RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSSSCG00070028622	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3695 bases	Strand	Plus strand
Position	X : 73125722 - 73129416	RNA binding domain	SMN
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070048827	SMN	PF06003	2.7e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSSCT00070057434	363	120aa	ENSSSCP00070048827

Gene Model

Click here to download ENSSSCG00070028622's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070028622's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070028622	sus_scrofa_usmarc	ENSSSCP00070029628	57.8947	48.6842	sus_scrofa_usmarc	ENSSSCP00070048827	36.6667	30.8333

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070028622

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression