RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070027011	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1641 bases	Strand	Plus strand
Position	2 : 73422398 - 73424038	RNA binding domain	Chibby
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070045920	Chibby	PF14645	1.6e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSSCT00070054160	504	167aa	ENSSSCP00070045920

Gene Model

Click here to download ENSSSCG00070027011's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070027011's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070044250	58.2677	38.5827	sus_scrofa_usmarc	ENSSSCP00070045920	44.3114	29.3413
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070000480	17.0022	12.0805	sus_scrofa_usmarc	ENSSSCP00070045920	45.509	32.3353
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070004215	11.8721	6.84932	sus_scrofa_usmarc	ENSSSCP00070045920	15.5689	8.98204

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa	ENSSSCP00000014908	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	85.6287	81.4371	equus_caballus	ENSECAP00000067306	59.0909	56.1983
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_jinhua	ENSSSCP00060035923	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_meishan	ENSSSCP00040022241	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_berkshire	ENSSSCP00065016900	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_bamei	ENSSSCP00050021130	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_landrace	ENSSSCP00045039879	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	73.6527	69.4611	ovis_aries_rambouillet	ENSOARP00020019245	86.6197	81.6901
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_rongchang	ENSSSCP00030013793	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_pietrain	ENSSSCP00055023417	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_hampshire	ENSSSCP00035009555	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	67.0659	63.4731	sus_scrofa_wuzhishan	ENSSSCP00005006770	82.963	78.5185
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_tibetan	ENSSSCP00015036273	89.8089	86.6242
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	85.6287	78.4431	bos_taurus	ENSBTAP00000055269	65.5963	60.0917
ENSSSCG00070027011	sus_scrofa_usmarc	ENSSSCP00070045920	84.4311	81.4371	sus_scrofa_largewhite	ENSSSCP00025036382	89.8089	86.6242

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression