RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070026116	Gene ID	100144768	Accession	-
Symbol	CBY1	Alias	-	Full Name	chibby family member 1, beta catenin antagonist
Status	Confidence	Length	10946 bases	Strand	Plus strand
Position	5 : 97869465 - 97880410	RNA binding domain	Chibby
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070044250	Chibby	PF14645	3.8e-46	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
CBY1-201	ENSSSCT00070052285	1799	127aa	ENSSSCP00070044250

Gene Model

Click here to download ENSSSCG00070026116's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070026116's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070045920	44.3114	29.3413	sus_scrofa_usmarc	ENSSSCP00070044250	58.2677	38.5827
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070000480	13.4228	7.60626	sus_scrofa_usmarc	ENSSSCP00070044250	47.2441	26.7717
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070004215	11.4155	6.39269	sus_scrofa_usmarc	ENSSSCP00070044250	19.685	11.0236

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	81.8898	79.5276	equus_caballus	ENSECAP00000081792	60.8187	59.0643
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_jinhua	ENSSSCP00060022933	100	100
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_meishan	ENSSSCP00040013569	80.8917	80.8917
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_berkshire	ENSSSCP00065012708	80.8917	80.8917
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_bamei	ENSSSCP00050046388	78.882	78.882
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_landrace	ENSSSCP00045039874	80.8917	80.8917
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	98.4252	96.8504	ovis_aries_rambouillet	ENSOARP00020013848	98.4252	96.8504
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_pietrain	ENSSSCP00055021270	100	100
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_hampshire	ENSSSCP00035019086	80.8917	80.8917
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	100	100	sus_scrofa_wuzhishan	ENSSSCP00005011395	100	100
ENSSSCG00070026116	sus_scrofa_usmarc	ENSSSCP00070044250	85.8268	80.315	bos_taurus	ENSBTAP00000071373	68.9873	64.557

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression