RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00070024999 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
45949 bases |
Strand |
Plus strand |
Position |
15 : 68104693 - 68150641 |
RNA binding domain |
RAP , FAST_2 , FAST_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00070042226 |
RAP |
PF08373 |
2e-16 |
1 |
ENSSSCP00070042226 |
FAST_2 |
PF08368 |
2.7e-28 |
2 |
ENSSSCP00070042226 |
FAST_1 |
PF06743 |
3.9e-21 |
3 |
ENSSSCP00070042222 |
RAP |
PF08373 |
2.2e-16 |
1 |
ENSSSCP00070042222 |
FAST_2 |
PF08368 |
3e-28 |
2 |
ENSSSCP00070042222 |
FAST_1 |
PF06743 |
4.2e-21 |
3 |
ENSSSCP00070042217 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00070042217 |
FAST_2 |
PF08368 |
3.2e-28 |
2 |
ENSSSCP00070042217 |
FAST_1 |
PF06743 |
7.7e-22 |
3 |
ENSSSCP00070042200 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00070042200 |
FAST_2 |
PF08368 |
3.2e-28 |
2 |
ENSSSCP00070042200 |
FAST_1 |
PF06743 |
1.4e-10 |
3 |
ENSSSCP00070042198 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00070042198 |
FAST_2 |
PF08368 |
2.5e-28 |
2 |
ENSSSCP00070042198 |
FAST_1 |
PF06743 |
8.3e-23 |
3 |
ENSSSCP00070042207 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00070042207 |
FAST_2 |
PF08368 |
1.2e-13 |
2 |
ENSSSCP00070042207 |
FAST_1 |
PF06743 |
6.1e-23 |
3 |
ENSSSCP00070042212 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00070042212 |
FAST_2 |
PF08368 |
2.7e-28 |
2 |
ENSSSCP00070042212 |
FAST_1 |
PF06743 |
4.4e-23 |
3 |
ENSSSCP00070042220 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00070042220 |
FAST_2 |
PF08368 |
3.3e-11 |
2 |
ENSSSCP00070042220 |
FAST_1 |
PF06743 |
7.1e-23 |
3 |
ENSSSCP00070042197 |
RAP |
PF08373 |
2.4e-16 |
1 |
ENSSSCP00070042197 |
FAST_2 |
PF08368 |
2.9e-28 |
2 |
ENSSSCP00070042197 |
FAST_1 |
PF06743 |
9.8e-23 |
3 |
ENSSSCP00070042204 |
RAP |
PF08373 |
2.4e-16 |
1 |
ENSSSCP00070042204 |
FAST_2 |
PF08368 |
2.9e-28 |
2 |
ENSSSCP00070042204 |
FAST_1 |
PF06743 |
9.8e-23 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00070049959 |
3510 |
836aa |
ENSSSCP00070042197 |
- |
ENSSSCT00070049960 |
3441 |
813aa |
ENSSSCP00070042198 |
- |
ENSSSCT00070049962 |
3381 |
793aa |
ENSSSCP00070042200 |
- |
ENSSSCT00070049967 |
3719 |
836aa |
ENSSSCP00070042204 |
- |
ENSSSCT00070049970 |
3590 |
793aa |
ENSSSCP00070042207 |
- |
ENSSSCT00070049975 |
3220 |
811aa |
ENSSSCP00070042212 |
- |
ENSSSCT00070049980 |
3184 |
799aa |
ENSSSCP00070042217 |
- |
ENSSSCT00070049983 |
3181 |
798aa |
ENSSSCP00070042220 |
- |
ENSSSCT00070049985 |
3163 |
792aa |
ENSSSCP00070042222 |
- |
ENSSSCT00070049989 |
3052 |
755aa |
ENSSSCP00070042226 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070016823 | 38.9728 | 23.1118 | sus_scrofa_usmarc | ENSSSCP00070042204 | 30.8612 | 18.3014 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070034729 | 35.9942 | 15.82 | sus_scrofa_usmarc | ENSSSCP00070042204 | 29.6651 | 13.0383 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070025262 | 37.8205 | 18.9103 | sus_scrofa_usmarc | ENSSSCP00070042204 | 28.2297 | 14.1148 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070031814 | 31.5372 | 15.8479 | sus_scrofa_usmarc | ENSSSCP00070042204 | 23.8038 | 11.9617 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 97.6077 | 97.3684 | sus_scrofa | ENSSSCP00000021544 | 96.568 | 96.3314 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 91.9856 | 83.4928 | equus_caballus | ENSECAP00000033561 | 92.4279 | 83.8942 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 99.8804 | sus_scrofa_jinhua | ENSSSCP00060017371 | 100 | 99.8804 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 99.7608 | sus_scrofa_meishan | ENSSSCP00040040905 | 100 | 99.7608 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065004146 | 100 | 100 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 99.7608 | sus_scrofa_bamei | ENSSSCP00050048000 | 100 | 99.7608 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045023555 | 100 | 100 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 91.866 | 84.0909 | ovis_aries_rambouillet | ENSOARP00020005886 | 92.3077 | 84.4952 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 99.8804 | 99.8804 | sus_scrofa_rongchang | ENSSSCP00030008279 | 99.8804 | 99.8804 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055038775 | 100 | 100 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005028463 | 100 | 100 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015028098 | 100 | 100 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 91.9856 | 84.5694 | bos_taurus | ENSBTAP00000051570 | 92.4279 | 84.976 |
ENSSSCG00070024999 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 99.8804 | sus_scrofa_largewhite | ENSSSCP00025030272 | 100 | 99.8804 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |