RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070024685	Gene ID	100152493	Accession	-
Symbol	RPP21	Alias	-	Full Name	ribonuclease P/MRP subunit p21
Status	Confidence	Length	16989 bases	Strand	Minus strand
Position	7 : 100561218 - 100578206	RNA binding domain	Rpr2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070041628	Rpr2	PF04032	2.8e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPP21-201	ENSSSCT00070049277	2659	154aa	ENSSSCP00070041628

Gene Model

Click here to download ENSSSCG00070024685's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070024685's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070024685

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	100	100	sus_scrofa	ENSSSCP00000022126	95.0617	95.0617
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	81.1688	77.2727	equus_caballus	ENSECAP00000070547	71.0227	67.6136
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	100	100	sus_scrofa_meishan	ENSSSCP00040044799	95.0617	95.0617
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	100	100	sus_scrofa_bamei	ENSSSCP00050008842	95.0617	95.0617
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	89.6104	85.0649	sus_scrofa_landrace	ENSSSCP00045048908	63.3028	60.0917
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	88.3117	86.3636	ovis_aries_rambouillet	ENSOARP00020014721	77.2727	75.5682
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	100	100	sus_scrofa_rongchang	ENSSSCP00030040565	95.0617	95.0617
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	96.1039	96.1039	sus_scrofa_wuzhishan	ENSSSCP00005010359	71.8447	71.8447
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	89.6104	85.0649	sus_scrofa_tibetan	ENSSSCP00015019552	63.3028	60.0917
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	87.6623	84.4156	bos_taurus	ENSBTAP00000061223	70.6806	68.0628
ENSSSCG00070024685	sus_scrofa_usmarc	ENSSSCP00070041628	100	100	sus_scrofa_largewhite	ENSSSCP00025012633	95.0617	95.0617

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression