RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00070023144 | Gene ID |
100625081 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
LUC7 like 3 pre-mRNA splicing factor |
Status |
Confidence |
Length |
37213 bases |
Strand |
Plus strand |
Position |
12 : 26608144 - 26645356 |
RNA binding domain |
LUC7 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00070038889 |
LUC7 |
PF03194 |
4.4e-89 |
1 |
ENSSSCP00070038874 |
LUC7 |
PF03194 |
1.5e-88 |
1 |
ENSSSCP00070038918 |
LUC7 |
PF03194 |
1.5e-88 |
1 |
ENSSSCP00070038884 |
LUC7 |
PF03194 |
1.5e-88 |
1 |
ENSSSCP00070038878 |
LUC7 |
PF03194 |
1.7e-88 |
1 |
ENSSSCP00070038899 |
LUC7 |
PF03194 |
2e-88 |
1 |
ENSSSCP00070038908 |
LUC7 |
PF03194 |
1.1e-22 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00070046093 |
3390 |
432aa |
ENSSSCP00070038874 |
- |
ENSSSCT00070046098 |
2593 |
638aa |
ENSSSCP00070038878 |
- |
ENSSSCT00070046105 |
2625 |
635aa |
ENSSSCP00070038884 |
- |
ENSSSCT00070046110 |
2644 |
655aa |
ENSSSCP00070038889 |
- |
ENSSSCT00070046121 |
2028 |
469aa |
ENSSSCP00070038899 |
- |
ENSSSCT00070046130 |
1193 |
79aa |
ENSSSCP00070038908 |
- |
ENSSSCT00070046140 |
1960 |
432aa |
ENSSSCP00070038918 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070037776 | 55.6373 | 34.3137 | sus_scrofa_usmarc | ENSSSCP00070038889 | 34.6565 | 21.374 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070029887 | 50.9804 | 31.3725 | sus_scrofa_usmarc | ENSSSCP00070038889 | 35.7252 | 21.9847 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 53.5878 | 53.2824 | sus_scrofa | ENSSSCP00000041688 | 98.5955 | 98.0337 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 74.3511 | 74.0458 | equus_caballus | ENSECAP00000010688 | 99.591 | 99.182 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 90.229 | 90.0763 | sus_scrofa_jinhua | ENSSSCP00060033327 | 100 | 99.8308 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 90.229 | 90.229 | sus_scrofa_meishan | ENSSSCP00040028914 | 100 | 100 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 64.8855 | 64.5802 | sus_scrofa_berkshire | ENSSSCP00065048120 | 100 | 99.5294 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 65.0382 | 64.7328 | sus_scrofa_bamei | ENSSSCP00050048474 | 98.8399 | 98.3759 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 90.229 | 90.229 | sus_scrofa_landrace | ENSSSCP00045017651 | 100 | 100 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 74.3511 | 74.0458 | ovis_aries_rambouillet | ENSOARP00020017907 | 99.591 | 99.182 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 90.229 | 90.0763 | sus_scrofa_rongchang | ENSSSCP00030025409 | 100 | 99.8308 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 65.3435 | 65.1908 | sus_scrofa_pietrain | ENSSSCP00055006730 | 99.5349 | 99.3023 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 65.0382 | 64.8855 | sus_scrofa_hampshire | ENSSSCP00035030548 | 98.8399 | 98.6079 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 99.8473 | 99.8473 | sus_scrofa_wuzhishan | ENSSSCP00005009439 | 99.8473 | 99.8473 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 100 | 99.8473 | sus_scrofa_tibetan | ENSSSCP00015026361 | 100 | 99.8473 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 73.1298 | 72.6718 | bos_taurus | ENSBTAP00000065992 | 97.556 | 96.945 |
ENSSSCG00070023144 | sus_scrofa_usmarc | ENSSSCP00070038889 | 70.8397 | 70.687 | sus_scrofa_largewhite | ENSSSCP00025035462 | 98.9339 | 98.7207 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |