Description

Ensembl ID ENSSSCG00070022395 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 33636 bases Strand Minus strand
Position 7 : 84717637 - 84751272 RNA binding domain RNA_pol_A_bac , RNA_pol_L
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00070037556 RNA_pol_A_bac PF01000 1e-29 1
ENSSSCP00070037556 RNA_pol_L PF01193 1.3e-23 2
ENSSSCP00070037561 RNA_pol_A_bac PF01000 1e-29 1
ENSSSCP00070037561 RNA_pol_L PF01193 1.3e-23 2
ENSSSCP00070037523 RNA_pol_A_bac PF01000 1.1e-29 1
ENSSSCP00070037523 RNA_pol_L PF01193 7.6e-12 2
ENSSSCP00070037533 RNA_pol_A_bac PF01000 1.2e-29 1
ENSSSCP00070037533 RNA_pol_L PF01193 1.7e-23 2
ENSSSCP00070037542 RNA_pol_A_bac PF01000 1.3e-29 1
ENSSSCP00070037542 RNA_pol_L PF01193 1.9e-23 2
ENSSSCP00070037553 RNA_pol_A_bac PF01000 9.8e-27 1
ENSSSCP00070037553 RNA_pol_L PF01193 1.2e-23 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00070044532 933 311aa ENSSSCP00070037523
- ENSSSCT00070044544 1263 337aa ENSSSCP00070037533
- ENSSSCT00070044555 1338 351aa ENSSSCP00070037542
- ENSSSCT00070044567 891 296aa ENSSSCP00070037553
- ENSSSCT00070044570 933 310aa ENSSSCP00070037556
- ENSSSCT00070044577 942 313aa ENSSSCP00070037561

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003455749.090928.7273sus_scrofa_usmarcENSSSCP0007003754238.461522.5071
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007000157830.693114.8515sus_scrofa_usmarcENSSSCP000700375428.831914.2735

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754299.430299.4302sus_scrofaENSSSCP0000006538299.430299.4302
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754294.017190.5983equus_caballusENSECAP0000007057871.739169.1304
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754287.464485.755sus_scrofa_jinhuaENSSSCP0006001787092.469990.6627
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754299.430299.4302sus_scrofa_meishanENSSSCP0004001172999.430299.4302
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP00070037542100100sus_scrofa_berkshireENSSSCP00065047353100100
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754288.034286.3248sus_scrofa_bameiENSSSCP0005000147393.072391.2651
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754288.034286.3248sus_scrofa_landraceENSSSCP0004503344393.072391.2651
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754296.866195.4416ovis_aries_rambouilletENSOARP0002002865198.265996.8208
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754294.017193.4473sus_scrofa_rongchangENSSSCP0003003715097.922997.3294
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754299.715199.7151sus_scrofa_pietrainENSSSCP0005503531199.715199.7151
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP00070037542100100sus_scrofa_hampshireENSSSCP00035041406100100
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP00070037542100100sus_scrofa_wuzhishanENSSSCP00005031859100100
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP00070037542100100sus_scrofa_tibetanENSSSCP00015009303100100
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754297.15195.4416bos_taurusENSBTAP0000002524698.554996.8208
ENSSSCG00070022395sus_scrofa_usmarcENSSSCP0007003754288.034286.3248sus_scrofa_largewhiteENSSSCP0002501987293.072391.2651

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression