RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00070022395 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
33636 bases |
Strand |
Minus strand |
Position |
7 : 84717637 - 84751272 |
RNA binding domain |
RNA_pol_A_bac , RNA_pol_L |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00070037556 |
RNA_pol_A_bac |
PF01000 |
1e-29 |
1 |
ENSSSCP00070037556 |
RNA_pol_L |
PF01193 |
1.3e-23 |
2 |
ENSSSCP00070037561 |
RNA_pol_A_bac |
PF01000 |
1e-29 |
1 |
ENSSSCP00070037561 |
RNA_pol_L |
PF01193 |
1.3e-23 |
2 |
ENSSSCP00070037523 |
RNA_pol_A_bac |
PF01000 |
1.1e-29 |
1 |
ENSSSCP00070037523 |
RNA_pol_L |
PF01193 |
7.6e-12 |
2 |
ENSSSCP00070037533 |
RNA_pol_A_bac |
PF01000 |
1.2e-29 |
1 |
ENSSSCP00070037533 |
RNA_pol_L |
PF01193 |
1.7e-23 |
2 |
ENSSSCP00070037542 |
RNA_pol_A_bac |
PF01000 |
1.3e-29 |
1 |
ENSSSCP00070037542 |
RNA_pol_L |
PF01193 |
1.9e-23 |
2 |
ENSSSCP00070037553 |
RNA_pol_A_bac |
PF01000 |
9.8e-27 |
1 |
ENSSSCP00070037553 |
RNA_pol_L |
PF01193 |
1.2e-23 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00070044532 |
933 |
311aa |
ENSSSCP00070037523 |
- |
ENSSSCT00070044544 |
1263 |
337aa |
ENSSSCP00070037533 |
- |
ENSSSCT00070044555 |
1338 |
351aa |
ENSSSCP00070037542 |
- |
ENSSSCT00070044567 |
891 |
296aa |
ENSSSCP00070037553 |
- |
ENSSSCT00070044570 |
933 |
310aa |
ENSSSCP00070037556 |
- |
ENSSSCT00070044577 |
942 |
313aa |
ENSSSCP00070037561 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070034557 | 49.0909 | 28.7273 | sus_scrofa_usmarc | ENSSSCP00070037542 | 38.4615 | 22.5071 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070001578 | 30.6931 | 14.8515 | sus_scrofa_usmarc | ENSSSCP00070037542 | 8.83191 | 4.2735 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 99.4302 | 99.4302 | sus_scrofa | ENSSSCP00000065382 | 99.4302 | 99.4302 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 94.0171 | 90.5983 | equus_caballus | ENSECAP00000070578 | 71.7391 | 69.1304 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 87.4644 | 85.755 | sus_scrofa_jinhua | ENSSSCP00060017870 | 92.4699 | 90.6627 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 99.4302 | 99.4302 | sus_scrofa_meishan | ENSSSCP00040011729 | 99.4302 | 99.4302 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065047353 | 100 | 100 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 88.0342 | 86.3248 | sus_scrofa_bamei | ENSSSCP00050001473 | 93.0723 | 91.2651 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 88.0342 | 86.3248 | sus_scrofa_landrace | ENSSSCP00045033443 | 93.0723 | 91.2651 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 96.8661 | 95.4416 | ovis_aries_rambouillet | ENSOARP00020028651 | 98.2659 | 96.8208 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 94.0171 | 93.4473 | sus_scrofa_rongchang | ENSSSCP00030037150 | 97.9229 | 97.3294 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 99.7151 | 99.7151 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.7151 | 99.7151 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035041406 | 100 | 100 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005031859 | 100 | 100 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015009303 | 100 | 100 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 97.151 | 95.4416 | bos_taurus | ENSBTAP00000025246 | 98.5549 | 96.8208 |
ENSSSCG00070022395 | sus_scrofa_usmarc | ENSSSCP00070037542 | 88.0342 | 86.3248 | sus_scrofa_largewhite | ENSSSCP00025019872 | 93.0723 | 91.2651 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |