| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00070021569 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
25507 bases |
Strand |
Plus strand |
| Position |
12 : 51957114 - 51982620 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_4 |
PF05000 |
8.1e-38 |
1 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_1 |
PF04997 |
1.1e-108 |
2 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_5 |
PF04998 |
1.8e-97 |
3 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_2 |
PF00623 |
2.3e-74 |
4 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_3 |
PF04983 |
1.7e-45 |
5 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
6 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
7 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
8 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
9 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
10 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
11 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
12 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
13 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
14 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
15 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
16 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
17 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
18 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
19 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
20 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
21 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
22 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
23 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
24 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
25 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
26 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
27 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
28 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
29 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
30 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
31 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
32 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
33 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
34 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
35 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
36 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
37 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
38 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_R |
PF05001 |
1.9e-18 |
39 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_6 |
PF04992 |
4.1e-64 |
40 |
| ENSSSCP00070036079 |
RNA_pol_Rpb1_7 |
PF04990 |
7.6e-52 |
41 |
| ENSSSCP00070036083 |
RNA_pol_Rpb1_1 |
PF04997 |
1.4e-109 |
1 |
| ENSSSCP00070036083 |
RNA_pol_Rpb1_2 |
PF00623 |
6.9e-75 |
2 |
| ENSSSCP00070036083 |
RNA_pol_Rpb1_3 |
PF04983 |
5.9e-07 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00070042891 |
5853 |
1950aa |
ENSSSCP00070036079 |
| - |
ENSSSCT00070042895 |
1698 |
566aa |
ENSSSCP00070036083 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070002709 | 53.2374 | 34.5324 | sus_scrofa_usmarc | ENSSSCP00070036079 | 37.9487 | 24.6154 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070049504 | 40.6414 | 25.0146 | sus_scrofa_usmarc | ENSSSCP00070036079 | 35.7436 | 22 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.7692 | 98.7692 | sus_scrofa | ENSSSCP00000024326 | 97.8659 | 97.8659 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.2051 | 98.2051 | equus_caballus | ENSECAP00000057709 | 98.407 | 98.407 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 99.8462 | 99.8462 | sus_scrofa_jinhua | ENSSSCP00060027889 | 99.3874 | 99.3874 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.7692 | 98.7692 | sus_scrofa_meishan | ENSSSCP00040010721 | 97.7665 | 97.7665 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.5641 | 98.5641 | sus_scrofa_berkshire | ENSSSCP00065033026 | 97.5635 | 97.5635 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 99.8462 | 99.8462 | sus_scrofa_bamei | ENSSSCP00050003478 | 99.3874 | 99.3874 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.5641 | 98.5641 | sus_scrofa_landrace | ENSSSCP00045037796 | 97.5635 | 97.5635 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.7692 | 98.7179 | ovis_aries_rambouillet | ENSOARP00020017833 | 97.7665 | 97.7157 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 97.1795 | 97.1795 | sus_scrofa_rongchang | ENSSSCP00030048869 | 97.5798 | 97.5798 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.5641 | 98.5641 | sus_scrofa_pietrain | ENSSSCP00055021233 | 97.5635 | 97.5635 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 96.8205 | 96.8205 | sus_scrofa_hampshire | ENSSSCP00035029604 | 97.5711 | 97.5711 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 91.4872 | 91.1282 | sus_scrofa_wuzhishan | ENSSSCP00005043646 | 95.0453 | 94.6723 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 97.2821 | 97.1795 | sus_scrofa_tibetan | ENSSSCP00015023396 | 96.002 | 95.9008 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 98.7692 | 98.7179 | bos_taurus | ENSBTAP00000065848 | 97.7665 | 97.7157 |
| ENSSSCG00070021569 | sus_scrofa_usmarc | ENSSSCP00070036079 | 93.8974 | 92.9744 | sus_scrofa_largewhite | ENSSSCP00025040164 | 92.01 | 91.1055 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
