RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070021425	Gene ID		Accession	-
Symbol	MIF4GD	Alias	-	Full Name	NA
Status	Confidence	Length	7372 bases	Strand	Plus strand
Position	12 : 5731106 - 5738477	RNA binding domain	MIF4G
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070035836	MIF4G	PF02854	1e-14	1
ENSSSCP00070035824	MIF4G	PF02854	1.1e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MIF4GD-201	ENSSSCT00070042593	983	243aa	ENSSSCP00070035824
MIF4GD-202	ENSSSCT00070042607	1924	259aa	ENSSSCP00070035836
MIF4GD-203	ENSSSCT00070042620	513	170aa	ENSSSCP00070035849

Gene Model

Click here to download ENSSSCG00070021425's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070021425's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070029918	18.0165	11.0744	sus_scrofa_usmarc	ENSSSCP00070035836	42.0849	25.8687

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	84.556	84.556	sus_scrofa	ENSSSCP00000077392	78.777	78.777
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	83.0116	81.0811	equus_caballus	ENSECAP00000016259	84.9802	83.004
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	81.0811	78.3784	ovis_aries_rambouillet	ENSOARP00020007839	83.004	80.2372
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	100	100	sus_scrofa_hampshire	ENSSSCP00035022990	100	100
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	100	99.6139	sus_scrofa_wuzhishan	ENSSSCP00005044342	100	99.6139
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	81.0811	79.5367	bos_taurus	ENSBTAP00000034575	94.5946	92.7928
ENSSSCG00070021425	sus_scrofa_usmarc	ENSSSCP00070035836	100	100	sus_scrofa_largewhite	ENSSSCP00025018531	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression