RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070015798	Gene ID	100625681	Accession	-
Symbol	NUDT21	Alias	-	Full Name	nudix hydrolase 21
Status	Confidence	Length	39964 bases	Strand	Minus strand
Position	6 : 137006878 - 137046841	RNA binding domain	NUDIX_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070025868	NUDIX_2	PF13869	6.7e-81	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
NUDT21-201	ENSSSCT00070031012	4008	227aa	ENSSSCP00070025868

Gene Model

Click here to download ENSSSCG00070015798's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070015798's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070036028	88.3495	85.4369	sus_scrofa_usmarc	ENSSSCP00070025868	40.0881	38.7665

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	97.3568	sus_scrofa	ENSSSCP00000064831	94.0928	93.2489
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	96.9163	equus_caballus	ENSECAP00000055960	87.1094	85.9375
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	97.3568	sus_scrofa_jinhua	ENSSSCP00060040950	94.0928	93.2489
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	100	100	sus_scrofa_meishan	ENSSSCP00040000936	100	100
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	97.3568	sus_scrofa_berkshire	ENSSSCP00065007322	94.0928	93.2489
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	99.1189	99.1189	sus_scrofa_landrace	ENSSSCP00045014737	99.1189	99.1189
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	99.1189	98.6784	ovis_aries_rambouillet	ENSOARP00020031054	99.1189	98.6784
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	97.7974	96.9163	sus_scrofa_rongchang	ENSSSCP00030005789	93.6709	92.827
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	97.3568	sus_scrofa_pietrain	ENSSSCP00055020802	94.0928	93.2489
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	97.3568	sus_scrofa_hampshire	ENSSSCP00035020543	94.0928	93.2489
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	98.2379	97.3568	sus_scrofa_wuzhishan	ENSSSCP00005044408	94.0928	93.2489
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	97.3568	96.4758	sus_scrofa_tibetan	ENSSSCP00015021949	93.2489	92.4051
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	99.1189	98.6784	bos_taurus	ENSBTAP00000013467	99.1189	98.6784
ENSSSCG00070015798	sus_scrofa_usmarc	ENSSSCP00070025868	100	100	sus_scrofa_largewhite	ENSSSCP00025041376	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression