Description

Ensembl ID ENSSSCG00070014844 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 9816 bases Strand Minus strand
Position 3 : 6206729 - 6216544 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00070024300 PPR_3 PF13812 8.4e-22 1
ENSSSCP00070024300 PPR_3 PF13812 8.4e-22 2
ENSSSCP00070024300 PPR_long PF17177 6.6e-16 3
ENSSSCP00070024300 PPR PF01535 5.3e-17 4
ENSSSCP00070024300 PPR PF01535 5.3e-17 5
ENSSSCP00070024300 PPR PF01535 5.3e-17 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00070029153 2076 691aa ENSSSCP00070024300

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007000927893.495993.2927sus_scrofa_usmarcENSSSCP0007002430066.570266.4255
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002742333.780219.571sus_scrofa_usmarcENSSSCP0007002430018.234410.5644

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430092.908892.4747sus_scrofaENSSSCP0000000814395.111194.6667
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430082.633976.7004equus_caballusENSECAP0000007415076.03270.5726
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430097.395196.8162sus_scrofa_jinhuaENSSSCP0006002505386.392885.8793
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430097.395196.8162sus_scrofa_meishanENSSSCP0004003276886.392885.8793
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430080.607877.1346sus_scrofa_rongchangENSSSCP0003002831976.933773.6188
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430095.803294.9349sus_scrofa_wuzhishanENSSSCP0000500882485.419484.6452
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430097.539896.9609sus_scrofa_tibetanENSSSCP0001502105986.521286.0077
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430088.277981.7656bos_taurusENSBTAP0000007370975.49569.9257
ENSSSCG00070014844sus_scrofa_usmarcENSSSCP0007002430097.250496.9609sus_scrofa_largewhiteENSSSCP0002502909786.264486.0077

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression