RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070011943	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	234 bases	Strand	Minus strand
Position	14 : 108023860 - 108024093	RNA binding domain	Ribosomal_S17
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070019258	Ribosomal_S17	PF00366	6.7e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSSCT00070023284	234	77aa	ENSSSCP00070019258

Gene Model

Click here to download ENSSSCG00070011943's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070011943's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070011943

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070011943	sus_scrofa_usmarc	ENSSSCP00070019258	100	100	sus_scrofa	ENSSSCP00000080519	100	100
ENSSSCG00070011943	sus_scrofa_usmarc	ENSSSCP00070019258	96.1039	96.1039	sus_scrofa_meishan	ENSSSCP00040002464	51.3889	51.3889

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression