RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00070011669	Gene ID		Accession	-
Symbol	EIF4G2	Alias	-	Full Name	NA
Status	Confidence	Length	102394 bases	Strand	Plus strand
Position	2 : 48215748 - 48318141	RNA binding domain	W2 , MIF4G , MA3
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070018834	W2	PF02020	7.2e-20	1
ENSSSCP00070018834	MIF4G	PF02854	1.8e-57	2
ENSSSCP00070018834	MA3	PF02847	1.2e-16	3
ENSSSCP00070018817	W2	PF02020	7.7e-20	1
ENSSSCP00070018817	MIF4G	PF02854	2e-57	2
ENSSSCP00070018817	MA3	PF02847	1.3e-16	3
ENSSSCP00070018849	W2	PF02020	8.4e-20	1
ENSSSCP00070018849	MIF4G	PF02854	2.1e-57	2
ENSSSCP00070018849	MA3	PF02847	1.4e-16	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
EIF4G2-201	ENSSSCT00070022755	4003	907aa	ENSSSCP00070018817
EIF4G2-202	ENSSSCT00070022774	5016	869aa	ENSSSCP00070018834
EIF4G2-203	ENSSSCT00070022790	2850	949aa	ENSSSCP00070018849

Gene Model

Click here to download ENSSSCG00070011669's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070011669's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070049152	24.0249	14.3584	sus_scrofa_usmarc	ENSSSCP00070018849	44.784	26.765
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070031090	26.4596	16.2112	sus_scrofa_usmarc	ENSSSCP00070018849	44.8894	27.5026

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa	ENSSSCP00000014250	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	95.5743	95.3635	equus_caballus	ENSECAP00000025177	100	99.7795
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_jinhua	ENSSSCP00060043340	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_meishan	ENSSSCP00040030528	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_berkshire	ENSSSCP00065038982	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_bamei	ENSSSCP00050018014	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_landrace	ENSSSCP00045035397	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	95.5743	95.4689	ovis_aries_rambouillet	ENSOARP00020017836	100	99.8897
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	99.8946	99.8946	sus_scrofa_rongchang	ENSSSCP00030013410	99.8946	99.8946
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_pietrain	ENSSSCP00055036077	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_hampshire	ENSSSCP00035005984	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_wuzhishan	ENSSSCP00005038400	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	99.5785	99.5785	sus_scrofa_tibetan	ENSSSCP00015022146	99.5785	99.5785
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	95.5743	95.5743	bos_taurus	ENSBTAP00000049614	100	100
ENSSSCG00070011669	sus_scrofa_usmarc	ENSSSCP00070018849	100	100	sus_scrofa_largewhite	ENSSSCP00025015618	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression