Description

Ensembl ID ENSSSCG00070010399 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7359 bases Strand Minus strand
Position 16 : 6028174 - 6035532 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00070016823 RAP PF08373 2e-15 1
ENSSSCP00070016823 FAST_2 PF08368 1.4e-26 2
ENSSSCP00070016823 FAST_1 PF06743 8.5e-19 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00070020239 1989 662aa ENSSSCP00070016823

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007004220430.861218.3014sus_scrofa_usmarcENSSSCP0007001682338.972823.1118
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007003472932.075515.6749sus_scrofa_usmarcENSSSCP0007001682333.383716.3142
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007002526236.538519.391sus_scrofa_usmarcENSSSCP0007001682334.441118.2779
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007003181431.378818.7005sus_scrofa_usmarcENSSSCP0007001682329.909417.8248

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682399.848999.8489sus_scrofaENSSSCP0000004929499.848999.8489
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682389.274982.4773equus_caballusENSECAP0000001257089.545582.7273
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682399.848999.6979sus_scrofa_jinhuaENSSSCP0006000373499.698399.5475
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682399.697999.5468sus_scrofa_meishanENSSSCP0004001893599.547599.3967
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682395.921495.1662sus_scrofa_berkshireENSSSCP0006502698298.602597.8261
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682395.770495.0151sus_scrofa_bameiENSSSCP0005004287597.839597.0679
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682310099.8489sus_scrofa_landraceENSSSCP0004504725899.849299.6983
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682387.915480.5136ovis_aries_rambouilletENSOARP0002002883888.315680.8801
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682399.848999.5468sus_scrofa_rongchangENSSSCP0003002090299.698399.3967
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682310099.8489sus_scrofa_pietrainENSSSCP0005503364799.849299.6983
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP00070016823100100sus_scrofa_hampshireENSSSCP0003500628599.849299.8492
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682310099.8489sus_scrofa_wuzhishanENSSSCP0000501843399.849299.6983
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682399.848999.6979sus_scrofa_tibetanENSSSCP0001500920299.698399.5475
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682388.972880.6646bos_taurusENSBTAP0000004339489.242480.9091
ENSSSCG00070010399sus_scrofa_usmarcENSSSCP0007001682395.770495.3172sus_scrofa_largewhiteENSSSCP0002500794398.447297.9814

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression