Description

Ensembl ID ENSSSCG00070008872 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 92420 bases Strand Minus strand
Position 10 : 10980191 - 11072610 RNA binding domain Upf2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00070014250 Upf2 PF04050 3.9e-32 1
ENSSSCP00070014250 MIF4G PF02854 7.7e-73 2
ENSSSCP00070014250 MIF4G PF02854 7.7e-73 3
ENSSSCP00070014250 MIF4G PF02854 7.7e-73 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00070017220 3810 1269aa ENSSSCP00070014250
- ENSSSCT00070017234 1104 367aa ENSSSCP00070014261

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070008872

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425099.921299.9212sus_scrofaENSSSCP0000002785299.842599.8425
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425099.290898.7392equus_caballusENSECAP0000001490998.514597.9672
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_jinhuaENSSSCP0006003481299.842699.8426
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_meishanENSSSCP0004004277799.842699.8426
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425094.326294.3262sus_scrofa_berkshireENSSSCP0006504896599.833299.8332
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_bameiENSSSCP0005002360099.842699.8426
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_landraceENSSSCP0004500316499.842699.8426
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425099.369698.818ovis_aries_rambouilletENSOARP0002000740099.213298.6625
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_rongchangENSSSCP0003000774499.842699.8426
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425099.842499.8424sus_scrofa_pietrainENSSSCP0005503756791.944891.9448
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425099.842499.8424sus_scrofa_hampshireENSSSCP0003501673091.944891.9448
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425097.005596.9267sus_scrofa_wuzhishanENSSSCP0000502922899.837899.7567
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_tibetanENSSSCP0001504351699.842699.8426
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP0007001425099.290898.7392bos_taurusENSBTAP0000006284099.134598.5838
ENSSSCG00070008872sus_scrofa_usmarcENSSSCP00070014250100100sus_scrofa_largewhiteENSSSCP0002504291699.842699.8426

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression