RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	ENSSSCG00070000312	Gene ID	100522270	Accession	-
Symbol		Alias	-	Full Name	chibby family member 2
Status	Confidence	Length	10110 bases	Strand	Plus strand
Position	11 : 57815555 - 57825664	RNA binding domain	Chibby
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00070000476	Chibby	PF14645	1.1e-13	1
ENSSSCP00070000480	Chibby	PF14645	4e-14	1
ENSSSCP00070000485	Chibby	PF14645	9.9e-14	1

Showing 1 to 3 of 3 entries

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSSCT00070000551	1548	430aa	ENSSSCP00070000476
-	ENSSSCT00070000555	1344	447aa	ENSSSCP00070000480
-	ENSSSCT00070000560	1456	423aa	ENSSSCP00070000485

Showing 1 to 3 of 3 entries

Gene Model

Click here to download ENSSSCG00070000312's gene model file

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00070000312's PPI file

Paralogs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070004215	44.7489	29.6804	sus_scrofa_usmarc	ENSSSCP00070000480	21.9239	14.5414
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070045920	45.509	32.3353	sus_scrofa_usmarc	ENSSSCP00070000480	17.0022	12.0805
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070044250	47.2441	26.7717	sus_scrofa_usmarc	ENSSSCP00070000480	13.4228	7.60626

Showing 1 to 3 of 3 entries

Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	91.9463	90.604	sus_scrofa	ENSSSCP00000010051	87.8205	86.5385
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	92.6174	87.6957	equus_caballus	ENSECAP00000078569	90.5908	85.7768
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	99.7763	99.7763	sus_scrofa_jinhua	ENSSSCP00060006867	99.7763	99.7763
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	99.5526	99.5526	sus_scrofa_meishan	ENSSSCP00040019912	99.5526	99.5526
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	89.4855	89.4855	sus_scrofa_meishan	ENSSSCP00040013184	94.3396	94.3396
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	100	100	sus_scrofa_berkshire	ENSSSCP00065028338	100	100
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	99.7763	99.7763	sus_scrofa_bamei	ENSSSCP00050033238	99.7763	99.7763
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	99.7763	99.7763	sus_scrofa_landrace	ENSSSCP00045046858	99.7763	99.7763
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	94.6309	91.0515	ovis_aries_rambouillet	ENSOARP00020009933	95.0562	91.4607
ENSSSCG00070000312	sus_scrofa_usmarc	ENSSSCP00070000480	99.7763	99.7763	sus_scrofa_rongchang	ENSSSCP00030039026	99.7763	99.7763

Showing 1 to 10 of 16 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Paralogs
Orthologs