RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065077375 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
114910 bases |
Strand |
Minus strand |
Position |
LUXW01046694.1 : 825190 - 940099 |
RNA binding domain |
LsmAD , PAM2 , SM-ATX |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065047911 |
LsmAD |
PF06741 |
2.6e-15 |
1 |
ENSSSCP00065047911 |
PAM2 |
PF07145 |
6.5e-06 |
2 |
ENSSSCP00065047911 |
SM-ATX |
PF14438 |
9.7e-21 |
3 |
ENSSSCP00065048000 |
LsmAD |
PF06741 |
3e-15 |
1 |
ENSSSCP00065048000 |
PAM2 |
PF07145 |
7e-06 |
2 |
ENSSSCP00065048000 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
ENSSSCP00065047968 |
LsmAD |
PF06741 |
3.3e-15 |
1 |
ENSSSCP00065047968 |
PAM2 |
PF07145 |
7.4e-06 |
2 |
ENSSSCP00065047968 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
ENSSSCP00065047929 |
LsmAD |
PF06741 |
3.3e-15 |
1 |
ENSSSCP00065047929 |
PAM2 |
PF07145 |
7.6e-06 |
2 |
ENSSSCP00065047929 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
ENSSSCP00065047783 |
LsmAD |
PF06741 |
3.4e-15 |
1 |
ENSSSCP00065047783 |
PAM2 |
PF07145 |
7.5e-06 |
2 |
ENSSSCP00065047783 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
ENSSSCP00065047759 |
LsmAD |
PF06741 |
3.5e-15 |
1 |
ENSSSCP00065047759 |
PAM2 |
PF07145 |
7.6e-06 |
2 |
ENSSSCP00065047759 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
ENSSSCP00065047859 |
LsmAD |
PF06741 |
3.6e-15 |
1 |
ENSSSCP00065047859 |
PAM2 |
PF07145 |
7.9e-06 |
2 |
ENSSSCP00065047859 |
SM-ATX |
PF14438 |
1.3e-20 |
3 |
ENSSSCP00065047746 |
LsmAD |
PF06741 |
3.6e-15 |
1 |
ENSSSCP00065047746 |
PAM2 |
PF07145 |
7.7e-06 |
2 |
ENSSSCP00065047746 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00065107146 |
5476 |
1177aa |
ENSSSCP00065047746 |
- |
ENSSSCT00065107171 |
5434 |
1163aa |
ENSSSCP00065047759 |
- |
ENSSSCT00065107204 |
5556 |
1155aa |
ENSSSCP00065047783 |
- |
ENSSSCT00065107339 |
4147 |
1203aa |
ENSSSCP00065047859 |
- |
ENSSSCT00065107444 |
6310 |
1008aa |
ENSSSCP00065047911 |
- |
ENSSSCT00065107480 |
4536 |
1158aa |
ENSSSCP00065047929 |
- |
ENSSSCT00065107563 |
4485 |
1141aa |
ENSSSCP00065047968 |
- |
ENSSSCT00065107653 |
6164 |
1078aa |
ENSSSCP00065048000 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065023614 | 50.8582 | 36.766 | sus_scrofa_berkshire | ENSSSCP00065047859 | 46.7997 | 33.8321 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 98.2544 | 97.6725 | sus_scrofa | ENSSSCP00000031182 | 88.5393 | 88.015 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 98.2544 | 97.6725 | sus_scrofa_usmarc | ENSSSCP00070021896 | 90.9931 | 90.4542 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 75.5611 | 74.9792 | sus_scrofa_wuzhishan | ENSSSCP00005015072 | 71.5748 | 71.0236 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060024678 | 100 | 100 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 99.9169 | 99.9169 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 81.1305 | 80.0499 | sus_scrofa_tibetan | ENSSSCP00015025251 | 82.9227 | 81.8182 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 99.9169 | 99.9169 | sus_scrofa_hampshire | ENSSSCP00035041437 | 99.9169 | 99.9169 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 98.3375 | 97.7556 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 83.7905 | 81.9618 | equus_caballus | ENSECAP00000026122 | 86.0068 | 84.1297 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 94.015 | 92.02 | ovis_aries_rambouillet | ENSOARP00020022647 | 88.4977 | 86.6197 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025011137 | 100 | 100 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030036854 | 100 | 100 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045037604 | 100 | 100 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050001657 | 100 | 100 |
ENSSSCG00065077375 | sus_scrofa_berkshire | ENSSSCP00065047859 | 95.5112 | 93.35 | bos_taurus | ENSBTAP00000029618 | 87.4429 | 85.4642 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |