RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00065061679	Gene ID		Accession	-
Symbol	SRP68	Alias	-	Full Name	NA
Status	Confidence	Length	38836 bases	Strand	Minus strand
Position	LUXW01070992.1 : 1184897 - 1223732	RNA binding domain	SRP68
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00065036898	SRP68	PF16969	2.7e-148	1
ENSSSCP00065036906	SRP68	PF16969	1.6e-139	1
ENSSSCP00065036917	SRP68	PF16969	3.8e-128	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
SRP68-201	ENSSSCT00065084567	6317	622aa	ENSSSCP00065036898
SRP68-202	ENSSSCT00065084578	6302	617aa	ENSSSCP00065036906
SRP68-203	ENSSSCT00065084588	3289	702aa	ENSSSCP00065036917

Gene Model

Click here to download ENSSSCG00065061679's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00065061679's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00065061679

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	93.8746	92.1652	sus_scrofa	ENSSSCP00000018214	90.274	88.6301
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	78.49	76.7806	sus_scrofa_usmarc	ENSSSCP00070033878	88.5852	86.6559
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	76.0684	73.6467	sus_scrofa_wuzhishan	ENSSSCP00005005805	86.5478	83.7925
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	78.49	76.7806	sus_scrofa_jinhua	ENSSSCP00060013574	88.5852	86.6559
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	78.49	76.7806	sus_scrofa_pietrain	ENSSSCP00055015616	88.5852	86.6559
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	30.7692	29.0598	sus_scrofa_tibetan	ENSSSCP00015028443	75.2613	71.0801
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	93.3048	91.5954	sus_scrofa_hampshire	ENSSSCP00035028638	89.726	88.0822
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	99.7151	99.7151	sus_scrofa_meishan	ENSSSCP00040046150	99.7151	99.7151
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	69.3732	64.8148	equus_caballus	ENSECAP00000060928	76.4521	71.4286
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	76.4957	73.3618	ovis_aries_rambouillet	ENSOARP00020015138	86.1958	82.6645
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	93.8746	92.1652	sus_scrofa_largewhite	ENSSSCP00025026115	90.274	88.6301
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	78.49	76.7806	sus_scrofa_rongchang	ENSSSCP00030002686	88.5852	86.6559
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	78.49	76.7806	sus_scrofa_landrace	ENSSSCP00045045315	88.5852	86.6559
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	71.6524	69.5157	sus_scrofa_bamei	ENSSSCP00050008709	84.5378	82.0168
ENSSSCG00065061679	sus_scrofa_berkshire	ENSSSCP00065036917	76.9231	74.2165	bos_taurus	ENSBTAP00000012161	86.262	83.2268

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression