RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065050530 | Gene ID |
|
Accession |
- |
Symbol |
FXR2 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
20663 bases |
Strand |
Plus strand |
Position |
LUXW01041847.1 : 4903342 - 4924004 |
RNA binding domain |
Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065030149 |
Agenet |
PF05641 |
4.5e-13 |
1 |
ENSSSCP00065030149 |
FXR_C1 |
PF16096 |
4.6e-34 |
2 |
ENSSSCP00065030149 |
KH_1 |
PF00013 |
4.1e-18 |
3 |
ENSSSCP00065030149 |
KH_9 |
PF17904 |
6.6e-30 |
4 |
ENSSSCP00065030149 |
FXMRP1_C_core |
PF12235 |
1.3e-39 |
5 |
ENSSSCP00065030153 |
FXR_C1 |
PF16096 |
3.4e-34 |
1 |
ENSSSCP00065030153 |
KH_1 |
PF00013 |
2.3e-18 |
2 |
ENSSSCP00065030153 |
KH_1 |
PF00013 |
2.3e-18 |
3 |
ENSSSCP00065030153 |
KH_9 |
PF17904 |
4.8e-30 |
4 |
ENSSSCP00065030153 |
FXMRP1_C_core |
PF12235 |
9.5e-40 |
5 |
ENSSSCP00065030156 |
FXR_C1 |
PF16096 |
3.4e-34 |
1 |
ENSSSCP00065030156 |
KH_1 |
PF00013 |
2.3e-18 |
2 |
ENSSSCP00065030156 |
KH_1 |
PF00013 |
2.3e-18 |
3 |
ENSSSCP00065030156 |
KH_9 |
PF17904 |
4.8e-30 |
4 |
ENSSSCP00065030156 |
FXMRP1_C_core |
PF12235 |
9.5e-40 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
FXR2-201 |
ENSSSCT00065069217 |
4227 |
715aa |
ENSSSCP00065030149 |
FXR2-202 |
ENSSSCT00065069223 |
3097 |
578aa |
ENSSSCP00065030153 |
FXR2-203 |
ENSSSCT00065069227 |
2618 |
578aa |
ENSSSCP00065030156 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065040113 | 74.7415 | 64.1064 | sus_scrofa_berkshire | ENSSSCP00065030149 | 70.7692 | 60.6993 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065007400 | 62.8165 | 51.5823 | sus_scrofa_berkshire | ENSSSCP00065030149 | 55.5245 | 45.5944 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 90.4895 | 90.0699 | sus_scrofa | ENSSSCP00000019019 | 97.0015 | 96.5517 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 91.1888 | 90.7692 | sus_scrofa_usmarc | ENSSSCP00070036472 | 97.0238 | 96.5774 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 81.6783 | 80.2797 | sus_scrofa_wuzhishan | ENSSSCP00005041810 | 89.8462 | 88.3077 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060030942 | 99.8603 | 99.8603 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055023437 | 100 | 100 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 78.042 | 77.6224 | sus_scrofa_tibetan | ENSSSCP00015019878 | 96.5398 | 96.0208 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035027961 | 100 | 100 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040009444 | 99.8603 | 99.8603 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 87.1329 | 86.1538 | equus_caballus | ENSECAP00000070437 | 96.142 | 95.0617 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 90.6294 | 89.3706 | ovis_aries_rambouillet | ENSOARP00020015487 | 96.2853 | 94.948 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025042133 | 99.8603 | 99.8603 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030048694 | 99.8603 | 99.8603 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045040345 | 100 | 100 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050003748 | 99.8603 | 99.8603 |
ENSSSCG00065050530 | sus_scrofa_berkshire | ENSSSCP00065030149 | 90.4895 | 89.5105 | bos_taurus | ENSBTAP00000068397 | 96.1367 | 95.0966 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |