Description

Ensembl ID ENSSSCG00065050530 Gene ID Accession -
Symbol FXR2 Alias - Full Name NA
Status Confidence Length 20663 bases Strand Plus strand
Position LUXW01041847.1 : 4903342 - 4924004 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065030149 Agenet PF05641 4.5e-13 1
ENSSSCP00065030149 FXR_C1 PF16096 4.6e-34 2
ENSSSCP00065030149 KH_1 PF00013 4.1e-18 3
ENSSSCP00065030149 KH_9 PF17904 6.6e-30 4
ENSSSCP00065030149 FXMRP1_C_core PF12235 1.3e-39 5
ENSSSCP00065030153 FXR_C1 PF16096 3.4e-34 1
ENSSSCP00065030153 KH_1 PF00013 2.3e-18 2
ENSSSCP00065030153 KH_1 PF00013 2.3e-18 3
ENSSSCP00065030153 KH_9 PF17904 4.8e-30 4
ENSSSCP00065030153 FXMRP1_C_core PF12235 9.5e-40 5
ENSSSCP00065030156 FXR_C1 PF16096 3.4e-34 1
ENSSSCP00065030156 KH_1 PF00013 2.3e-18 2
ENSSSCP00065030156 KH_1 PF00013 2.3e-18 3
ENSSSCP00065030156 KH_9 PF17904 4.8e-30 4
ENSSSCP00065030156 FXMRP1_C_core PF12235 9.5e-40 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
FXR2-201 ENSSSCT00065069217 4227 715aa ENSSSCP00065030149
FXR2-202 ENSSSCT00065069223 3097 578aa ENSSSCP00065030153
FXR2-203 ENSSSCT00065069227 2618 578aa ENSSSCP00065030156

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006504011374.741564.1064sus_scrofa_berkshireENSSSCP0006503014970.769260.6993
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006500740062.816551.5823sus_scrofa_berkshireENSSSCP0006503014955.524545.5944

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014990.489590.0699sus_scrofaENSSSCP0000001901997.001596.5517
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014991.188890.7692sus_scrofa_usmarcENSSSCP0007003647297.023896.5774
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014981.678380.2797sus_scrofa_wuzhishanENSSSCP0000504181089.846288.3077
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_jinhuaENSSSCP0006003094299.860399.8603
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_pietrainENSSSCP00055023437100100
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014978.04277.6224sus_scrofa_tibetanENSSSCP0001501987896.539896.0208
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_hampshireENSSSCP00035027961100100
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_meishanENSSSCP0004000944499.860399.8603
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014987.132986.1538equus_caballusENSECAP0000007043796.14295.0617
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014990.629489.3706ovis_aries_rambouilletENSOARP0002001548796.285394.948
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_largewhiteENSSSCP0002504213399.860399.8603
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_rongchangENSSSCP0003004869499.860399.8603
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_landraceENSSSCP00045040345100100
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP00065030149100100sus_scrofa_bameiENSSSCP0005000374899.860399.8603
ENSSSCG00065050530sus_scrofa_berkshireENSSSCP0006503014990.489589.5105bos_taurusENSBTAP0000006839796.136795.0966

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression