| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00065039698 | Gene ID |
|
Accession |
- |
| Symbol |
ATXN2L |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
13134 bases |
Strand |
Plus strand |
| Position |
LUXW01019135.1 : 723438 - 736571 |
RNA binding domain |
LsmAD , PAM2 , SM-ATX |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00065023594 |
LsmAD |
PF06741 |
5.9e-17 |
1 |
| ENSSSCP00065023594 |
PAM2 |
PF07145 |
2.1e-05 |
2 |
| ENSSSCP00065023594 |
SM-ATX |
PF14438 |
3.1e-17 |
3 |
| ENSSSCP00065023587 |
LsmAD |
PF06741 |
6.1e-17 |
1 |
| ENSSSCP00065023587 |
PAM2 |
PF07145 |
2.3e-05 |
2 |
| ENSSSCP00065023587 |
SM-ATX |
PF14438 |
3.2e-17 |
3 |
| ENSSSCP00065023620 |
LsmAD |
PF06741 |
6.2e-17 |
1 |
| ENSSSCP00065023620 |
PAM2 |
PF07145 |
2.3e-05 |
2 |
| ENSSSCP00065023620 |
SM-ATX |
PF14438 |
7.3e-19 |
3 |
| ENSSSCP00065023610 |
LsmAD |
PF06741 |
6.3e-17 |
1 |
| ENSSSCP00065023610 |
PAM2 |
PF07145 |
2.4e-05 |
2 |
| ENSSSCP00065023610 |
SM-ATX |
PF14438 |
7.4e-19 |
3 |
| ENSSSCP00065023605 |
LsmAD |
PF06741 |
6.3e-17 |
1 |
| ENSSSCP00065023605 |
PAM2 |
PF07145 |
2.4e-05 |
2 |
| ENSSSCP00065023605 |
SM-ATX |
PF14438 |
7.6e-19 |
3 |
| ENSSSCP00065023569 |
LsmAD |
PF06741 |
6.6e-17 |
1 |
| ENSSSCP00065023569 |
PAM2 |
PF07145 |
2.5e-05 |
2 |
| ENSSSCP00065023569 |
SM-ATX |
PF14438 |
7.8e-19 |
3 |
| ENSSSCP00065023599 |
LsmAD |
PF06741 |
6.9e-17 |
1 |
| ENSSSCP00065023599 |
PAM2 |
PF07145 |
2.6e-05 |
2 |
| ENSSSCP00065023599 |
SM-ATX |
PF14438 |
8.1e-19 |
3 |
| ENSSSCP00065023614 |
LsmAD |
PF06741 |
7.2e-17 |
1 |
| ENSSSCP00065023614 |
PAM2 |
PF07145 |
2.7e-05 |
2 |
| ENSSSCP00065023614 |
SM-ATX |
PF14438 |
8.6e-19 |
3 |
| ENSSSCP00065023625 |
PAM2 |
PF07145 |
2e-05 |
1 |
| ENSSSCP00065023625 |
SM-ATX |
PF14438 |
2.9e-17 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| ATXN2L-201 |
ENSSSCT00065054255 |
4189 |
1039aa |
ENSSSCP00065023569 |
| ATXN2L-202 |
ENSSSCT00065054291 |
4685 |
984aa |
ENSSSCP00065023587 |
| ATXN2L-203 |
ENSSSCT00065054302 |
4589 |
952aa |
ENSSSCP00065023594 |
| ATXN2L-204 |
ENSSSCT00065054308 |
4683 |
1069aa |
ENSSSCP00065023599 |
| ATXN2L-205 |
ENSSSCT00065054317 |
4310 |
989aa |
ENSSSCP00065023605 |
| ATXN2L-206 |
ENSSSCT00065054331 |
4237 |
1004aa |
ENSSSCP00065023610 |
| ATXN2L-207 |
ENSSSCT00065054342 |
4315 |
1107aa |
ENSSSCP00065023614 |
| ATXN2L-208 |
ENSSSCT00065054354 |
3630 |
992aa |
ENSSSCP00065023620 |
| ATXN2L-209 |
ENSSSCT00065054362 |
3835 |
891aa |
ENSSSCP00065023625 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065047859 | 46.7997 | 33.8321 | sus_scrofa_berkshire | ENSSSCP00065023614 | 50.8582 | 36.766 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 93.6766 | 93.4959 | sus_scrofa | ENSSSCP00000043547 | 96.0185 | 95.8333 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 93.6766 | 93.4959 | sus_scrofa_usmarc | ENSSSCP00070026551 | 96.1967 | 96.0111 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 79.5845 | 79.3135 | sus_scrofa_wuzhishan | ENSSSCP00005045806 | 81.4986 | 81.2211 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 96.6576 | 96.6576 | sus_scrofa_jinhua | ENSSSCP00060007694 | 99.6276 | 99.6276 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055049084 | 100 | 100 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 99.9097 | 99.9097 | sus_scrofa_tibetan | ENSSSCP00015026985 | 99.3711 | 99.3711 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 97.1996 | 97.1996 | sus_scrofa_hampshire | ENSSSCP00035038128 | 95.053 | 95.053 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040032587 | 100 | 100 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 91.3279 | 90.5149 | equus_caballus | ENSECAP00000076766 | 93.6979 | 92.8638 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 93.6766 | 92.8636 | ovis_aries_rambouillet | ENSOARP00020033941 | 94.6168 | 93.7956 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 99.8193 | 99.8193 | sus_scrofa_largewhite | ENSSSCP00025042487 | 99.8193 | 99.8193 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 93.6766 | 93.3153 | sus_scrofa_rongchang | ENSSSCP00030048500 | 94.3585 | 93.9945 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 93.6766 | 93.4959 | sus_scrofa_landrace | ENSSSCP00045045530 | 96.0185 | 95.8333 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 99.9097 | 99.9097 | sus_scrofa_bamei | ENSSSCP00050039201 | 99.9097 | 99.9097 |
| ENSSSCG00065039698 | sus_scrofa_berkshire | ENSSSCP00065023614 | 93.8573 | 93.0443 | bos_taurus | ENSBTAP00000056890 | 94.4545 | 93.6364 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
