Description

Ensembl ID ENSSSCG00065024761 Gene ID Accession -
Symbol SKIV2L Alias - Full Name Sus scrofa Ski2 like RNA helicase (SKIV2L), mRNA.
Status Confidence Length 10609 bases Strand Plus strand
Position LUXW01036317.1 : 682024 - 692632 RNA binding domain DEAD , rRNA_proc-arch
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065013667 DEAD PF00270 3.8e-16 1
ENSSSCP00065013667 rRNA_proc-arch PF13234 3e-45 2
ENSSSCP00065013663 DEAD PF00270 3.8e-16 1
ENSSSCP00065013663 rRNA_proc-arch PF13234 2.9e-45 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SKIV2L-201 ENSSSCT00065033092 3889 1248aa ENSSSCP00065013663
SKIV2L-202 ENSSSCT00065033100 3883 1246aa ENSSSCP00065013667
SKIV2L-203 ENSSSCT00065033115 3604 119aa ENSSSCP00065013674

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006503243716.47757.85293sus_scrofa_berkshireENSSSCP0006501366329.086513.8622
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501007818.42369.38104sus_scrofa_berkshireENSSSCP0006501366330.528815.5449
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006502609021.83111.8545sus_scrofa_berkshireENSSSCP0006501366329.807716.1859
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501534154.632336.9627sus_scrofa_berkshireENSSSCP0006501366345.833331.0096
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006504187329.293914.8855sus_scrofa_berkshireENSSSCP0006501366324.599412.5
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501727625.219712.8465sus_scrofa_berkshireENSSSCP0006501366329.887815.2244
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006503157614.62927.17196sus_scrofa_berkshireENSSSCP0006501366328.76614.1026

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366398.958398.7179sus_scrofaENSSSCP0000000152499.117298.8764
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP00065013663100100sus_scrofa_usmarcENSSSCP00070038870100100
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.919999.9199sus_scrofa_wuzhishanENSSSCP0000504414799.839999.8399
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.919999.9199sus_scrofa_jinhuaENSSSCP0006004618399.919999.9199
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.839799.8397sus_scrofa_pietrainENSSSCP0005503617799.839799.8397
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.839799.8397sus_scrofa_tibetanENSSSCP0001504199299.839799.8397
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.919999.9199sus_scrofa_hampshireENSSSCP0003503571399.919999.9199
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.919999.9199sus_scrofa_meishanENSSSCP0004003428299.919999.9199
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366394.631492.7885equus_caballusENSECAP0000001983297.68495.7816
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.919999.9199sus_scrofa_largewhiteENSSSCP0002503941099.919999.9199
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.919999.9199sus_scrofa_rongchangENSSSCP0003003318799.919999.9199
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP00065013663100100sus_scrofa_landraceENSSSCP00045048045100100
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366399.839799.8397sus_scrofa_bameiENSSSCP0005001115999.839799.8397
ENSSSCG00065024761sus_scrofa_berkshireENSSSCP0006501366397.275695.1923bos_taurusENSBTAP0000000733997.431895.3451

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression