RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065024761 | Gene ID |
|
Accession |
- |
Symbol |
SKIV2L |
Alias |
- |
Full Name |
Sus scrofa Ski2 like RNA helicase (SKIV2L), mRNA. |
Status |
Confidence |
Length |
10609 bases |
Strand |
Plus strand |
Position |
LUXW01036317.1 : 682024 - 692632 |
RNA binding domain |
DEAD , rRNA_proc-arch |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065013667 |
DEAD |
PF00270 |
3.8e-16 |
1 |
ENSSSCP00065013667 |
rRNA_proc-arch |
PF13234 |
3e-45 |
2 |
ENSSSCP00065013663 |
DEAD |
PF00270 |
3.8e-16 |
1 |
ENSSSCP00065013663 |
rRNA_proc-arch |
PF13234 |
2.9e-45 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
SKIV2L-201 |
ENSSSCT00065033092 |
3889 |
1248aa |
ENSSSCP00065013663 |
SKIV2L-202 |
ENSSSCT00065033100 |
3883 |
1246aa |
ENSSSCP00065013667 |
SKIV2L-203 |
ENSSSCT00065033115 |
3604 |
119aa |
ENSSSCP00065013674 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065032437 | 16.4775 | 7.85293 | sus_scrofa_berkshire | ENSSSCP00065013663 | 29.0865 | 13.8622 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065010078 | 18.4236 | 9.38104 | sus_scrofa_berkshire | ENSSSCP00065013663 | 30.5288 | 15.5449 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065026090 | 21.831 | 11.8545 | sus_scrofa_berkshire | ENSSSCP00065013663 | 29.8077 | 16.1859 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065015341 | 54.6323 | 36.9627 | sus_scrofa_berkshire | ENSSSCP00065013663 | 45.8333 | 31.0096 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065041873 | 29.2939 | 14.8855 | sus_scrofa_berkshire | ENSSSCP00065013663 | 24.5994 | 12.5 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065017276 | 25.2197 | 12.8465 | sus_scrofa_berkshire | ENSSSCP00065013663 | 29.8878 | 15.2244 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065031576 | 14.6292 | 7.17196 | sus_scrofa_berkshire | ENSSSCP00065013663 | 28.766 | 14.1026 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 98.9583 | 98.7179 | sus_scrofa | ENSSSCP00000001524 | 99.1172 | 98.8764 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070038870 | 100 | 100 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.9199 | 99.9199 | sus_scrofa_wuzhishan | ENSSSCP00005044147 | 99.8399 | 99.8399 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.9199 | 99.9199 | sus_scrofa_jinhua | ENSSSCP00060046183 | 99.9199 | 99.9199 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.8397 | 99.8397 | sus_scrofa_pietrain | ENSSSCP00055036177 | 99.8397 | 99.8397 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.8397 | 99.8397 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.8397 | 99.8397 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.9199 | 99.9199 | sus_scrofa_hampshire | ENSSSCP00035035713 | 99.9199 | 99.9199 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.9199 | 99.9199 | sus_scrofa_meishan | ENSSSCP00040034282 | 99.9199 | 99.9199 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 94.6314 | 92.7885 | equus_caballus | ENSECAP00000019832 | 97.684 | 95.7816 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.9199 | 99.9199 | sus_scrofa_largewhite | ENSSSCP00025039410 | 99.9199 | 99.9199 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.9199 | 99.9199 | sus_scrofa_rongchang | ENSSSCP00030033187 | 99.9199 | 99.9199 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045048045 | 100 | 100 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.8397 | 99.8397 | sus_scrofa_bamei | ENSSSCP00050011159 | 99.8397 | 99.8397 |
ENSSSCG00065024761 | sus_scrofa_berkshire | ENSSSCP00065013663 | 97.2756 | 95.1923 | bos_taurus | ENSBTAP00000007339 | 97.4318 | 95.3451 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |