RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065024350 | Gene ID |
|
Accession |
- |
Symbol |
LSM6 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
19264 bases |
Strand |
Plus strand |
Position |
LUXW01037552.1 : 785017 - 804280 |
RNA binding domain |
LSM |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065013387 |
LSM |
PF01423 |
8.6e-16 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
LSM6-201 |
ENSSSCT00065032514 |
4473 |
124aa |
ENSSSCP00065013387 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065041020 | 54.6512 | 40.6977 | sus_scrofa_berkshire | ENSSSCP00065013387 | 37.9032 | 28.2258 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa | ENSSSCP00000032187 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070041514 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005022737 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060030693 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055023800 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015018494 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035028511 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040012682 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 59.6774 | 53.2258 | ovis_aries_rambouillet | ENSOARP00020006000 | 88.0952 | 78.5714 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025035579 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030032740 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045046889 | 100 | 100 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 100 | 99.1936 | sus_scrofa_bamei | ENSSSCP00050033835 | 100 | 99.1936 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 60.4839 | 57.2581 | bos_taurus | ENSBTAP00000063045 | 74.2574 | 70.297 |
ENSSSCG00065024350 | sus_scrofa_berkshire | ENSSSCP00065013387 | 54.0323 | 53.2258 | bos_taurus | ENSBTAP00000071619 | 83.75 | 82.5 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |