| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00065023269 | Gene ID |
|
Accession |
- |
| Symbol |
LSM14B |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
11873 bases |
Strand |
Minus strand |
| Position |
LUXW01040976.1 : 14414 - 26286 |
RNA binding domain |
LSM14 , SM-ATX , FDF |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00065012695 |
LSM14 |
PF12701 |
2.9e-30 |
1 |
| ENSSSCP00065012695 |
SM-ATX |
PF14438 |
1.5e-08 |
2 |
| ENSSSCP00065012690 |
LSM14 |
PF12701 |
9.8e-30 |
1 |
| ENSSSCP00065012690 |
SM-ATX |
PF14438 |
6e-08 |
2 |
| ENSSSCP00065012690 |
FDF |
PF09532 |
3.1e-25 |
3 |
| ENSSSCP00065012684 |
LSM14 |
PF12701 |
1.1e-29 |
1 |
| ENSSSCP00065012684 |
SM-ATX |
PF14438 |
6e-08 |
2 |
| ENSSSCP00065012684 |
FDF |
PF09532 |
1.6e-25 |
3 |
| ENSSSCP00065012675 |
LSM14 |
PF12701 |
1.8e-11 |
1 |
| ENSSSCP00065012675 |
FDF |
PF09532 |
3e-25 |
2 |
| ENSSSCP00065012679 |
LSM14 |
PF12701 |
1.9e-11 |
1 |
| ENSSSCP00065012679 |
FDF |
PF09532 |
1.3e-08 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| LSM14B-203 |
ENSSSCT00065030974 |
2704 |
453aa |
ENSSSCP00065012675 |
| LSM14B-204 |
ENSSSCT00065030987 |
2553 |
452aa |
ENSSSCP00065012679 |
| LSM14B-201 |
ENSSSCT00065030997 |
2631 |
502aa |
ENSSSCP00065012684 |
| LSM14B-202 |
ENSSSCT00065031012 |
2514 |
463aa |
ENSSSCP00065012690 |
| LSM14B-205 |
ENSSSCT00065031020 |
825 |
221aa |
ENSSSCP00065012695 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065031702 | 58.9633 | 49.2441 | sus_scrofa_berkshire | ENSSSCP00065012684 | 54.3825 | 45.4183 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 84.4622 | 84.4622 | sus_scrofa | ENSSSCP00000053189 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 86.8526 | 83.8645 | sus_scrofa_usmarc | ENSSSCP00070033496 | 58.5235 | 56.5101 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 20.7171 | 16.7331 | sus_scrofa_wuzhishan | ENSSSCP00005033378 | 52.5253 | 42.4242 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 71.1155 | 69.5219 | sus_scrofa_jinhua | ENSSSCP00060016357 | 74.8428 | 73.1656 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 84.4622 | 84.4622 | sus_scrofa_pietrain | ENSSSCP00055010611 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 84.4622 | 84.4622 | sus_scrofa_hampshire | ENSSSCP00035002384 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 84.4622 | 84.4622 | sus_scrofa_meishan | ENSSSCP00040006674 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 80.0797 | 78.6853 | equus_caballus | ENSECAP00000035118 | 94.8113 | 93.1604 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 38.247 | 35.6574 | ovis_aries_rambouillet | ENSOARP00020031763 | 83.4783 | 77.8261 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 72.7092 | 71.3147 | ovis_aries_rambouillet | ENSOARP00020009041 | 94.8052 | 92.987 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 84.4622 | 84.4622 | sus_scrofa_largewhite | ENSSSCP00025040674 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030018515 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 99.8008 | 99.8008 | sus_scrofa_landrace | ENSSSCP00045000911 | 99.8008 | 99.8008 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 84.4622 | 84.4622 | sus_scrofa_bamei | ENSSSCP00050042702 | 100 | 100 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 79.8805 | 77.8884 | bos_taurus | ENSBTAP00000028723 | 94.5755 | 92.217 |
| ENSSSCG00065023269 | sus_scrofa_berkshire | ENSSSCP00065012684 | 26.2948 | 21.7131 | bos_taurus | ENSBTAP00000057304 | 60 | 49.5455 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
