Description

Ensembl ID ENSSSCG00065023088 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 13493 bases Strand Minus strand
Position LUXW01015764.1 : 632308 - 645800 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065012554 LSM PF01423 1.6e-15 1
ENSSSCP00065012551 LSM PF01423 2.4e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00065030711 1987 484aa ENSSSCP00065012551
- ENSSSCT00065030717 1548 120aa ENSSSCP00065012554

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006500986928.350515.9794sus_scrofa_berkshireENSSSCP0006501255111.36366.40496
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006500756552.100832.7731sus_scrofa_berkshireENSSSCP0006501255112.80998.05785

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255156.40556.405sus_scrofaENSSSCP0000001073197.15397.153
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255199.173698.7603sus_scrofa_usmarcENSSSCP0007003564799.173698.7603
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255134.297533.0578sus_scrofa_wuzhishanENSSSCP0000503967071.861569.2641
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255199.173698.9669sus_scrofa_jinhuaENSSSCP0006003668599.173698.9669
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP00065012551100100sus_scrofa_pietrainENSSSCP00055016388100100
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255182.851282.8512sus_scrofa_tibetanENSSSCP00015011759100100
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255199.380299.1736sus_scrofa_hampshireENSSSCP0003504502299.380299.1736
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255199.380299.3802sus_scrofa_meishanENSSSCP0004003383199.380299.3802
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255122.520722.314equus_caballusENSECAP0000007779690.833390
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255126.033126.0331ovis_aries_rambouilletENSOARP00020033385100100
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255199.586899.3802sus_scrofa_largewhiteENSSSCP0002503316399.586899.3802
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP00065012551100100sus_scrofa_rongchangENSSSCP00030048858100100
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP00065012551100100sus_scrofa_landraceENSSSCP00045013413100100
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP00065012551100100sus_scrofa_bameiENSSSCP00050013444100100
ENSSSCG00065023088sus_scrofa_berkshireENSSSCP0006501255140.082635.7438bos_taurusENSBTAP0000007040955.587449.5702

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression