RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065023088 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
13493 bases |
Strand |
Minus strand |
Position |
LUXW01015764.1 : 632308 - 645800 |
RNA binding domain |
LSM |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065012554 |
LSM |
PF01423 |
1.6e-15 |
1 |
ENSSSCP00065012551 |
LSM |
PF01423 |
2.4e-14 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00065030711 |
1987 |
484aa |
ENSSSCP00065012551 |
- |
ENSSSCT00065030717 |
1548 |
120aa |
ENSSSCP00065012554 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065009869 | 28.3505 | 15.9794 | sus_scrofa_berkshire | ENSSSCP00065012551 | 11.3636 | 6.40496 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065007565 | 52.1008 | 32.7731 | sus_scrofa_berkshire | ENSSSCP00065012551 | 12.8099 | 8.05785 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 56.405 | 56.405 | sus_scrofa | ENSSSCP00000010731 | 97.153 | 97.153 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 99.1736 | 98.7603 | sus_scrofa_usmarc | ENSSSCP00070035647 | 99.1736 | 98.7603 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 34.2975 | 33.0578 | sus_scrofa_wuzhishan | ENSSSCP00005039670 | 71.8615 | 69.2641 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 99.1736 | 98.9669 | sus_scrofa_jinhua | ENSSSCP00060036685 | 99.1736 | 98.9669 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055016388 | 100 | 100 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 82.8512 | 82.8512 | sus_scrofa_tibetan | ENSSSCP00015011759 | 100 | 100 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 99.3802 | 99.1736 | sus_scrofa_hampshire | ENSSSCP00035045022 | 99.3802 | 99.1736 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 99.3802 | 99.3802 | sus_scrofa_meishan | ENSSSCP00040033831 | 99.3802 | 99.3802 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 22.5207 | 22.314 | equus_caballus | ENSECAP00000077796 | 90.8333 | 90 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 26.0331 | 26.0331 | ovis_aries_rambouillet | ENSOARP00020033385 | 100 | 100 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 99.5868 | 99.3802 | sus_scrofa_largewhite | ENSSSCP00025033163 | 99.5868 | 99.3802 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030048858 | 100 | 100 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045013413 | 100 | 100 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050013444 | 100 | 100 |
ENSSSCG00065023088 | sus_scrofa_berkshire | ENSSSCP00065012551 | 40.0826 | 35.7438 | bos_taurus | ENSBTAP00000070409 | 55.5874 | 49.5702 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |