Description

Ensembl ID ENSSSCG00065018180 Gene ID Accession -
Symbol LSM4 Alias - Full Name NA
Status Confidence Length 17678 bases Strand Minus strand
Position LUXW01007133.1 : 2120372 - 2138049 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065009869 LSM PF01423 3e-16 1
ENSSSCP00065009871 LSM PF01423 1.5e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
LSM4-201 ENSSSCT00065024168 7044 194aa ENSSSCP00065009869
LSM4-202 ENSSSCT00065024171 1130 125aa ENSSSCP00065009871

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP0006500756537.815121.0084sus_scrofa_berkshireENSSSCP0006500986923.195912.8866
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP0006501255111.36366.40496sus_scrofa_berkshireENSSSCP0006500986928.350515.9794

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP0006500986960.309359.2784sus_scrofaENSSSCP0000008096684.172782.7338
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_usmarcENSSSCP00070024880100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_jinhuaENSSSCP00060020246100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_pietrainENSSSCP00055036831100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_tibetanENSSSCP00015031365100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_hampshireENSSSCP00035033762100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_meishanENSSSCP00040032067100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP0006500986944.845436.0825equus_caballusENSECAP0000008731928.155322.6537
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP0006500986960.309359.2784ovis_aries_rambouilletENSOARP0002000608684.172782.7338
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_largewhiteENSSSCP00025022373100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_rongchangENSSSCP00030037160100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_landraceENSSSCP00045027695100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP00065009869100100sus_scrofa_bameiENSSSCP00050044719100100
ENSSSCG00065018180sus_scrofa_berkshireENSSSCP0006500986959.793858.7629bos_taurusENSBTAP0000001131283.453282.0144

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression