RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065017921 | Gene ID |
|
Accession |
- |
Symbol |
TBRG4 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
12057 bases |
Strand |
Minus strand |
Position |
LUXW01048271.1 : 2925947 - 2938003 |
RNA binding domain |
RAP , FAST_2 , FAST_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065009695 |
RAP |
PF08373 |
5.5e-11 |
1 |
ENSSSCP00065009695 |
FAST_2 |
PF08368 |
4.7e-25 |
2 |
ENSSSCP00065009695 |
FAST_1 |
PF06743 |
1.5e-21 |
3 |
ENSSSCP00065009692 |
RAP |
PF08373 |
6.8e-11 |
1 |
ENSSSCP00065009692 |
FAST_2 |
PF08368 |
6.7e-25 |
2 |
ENSSSCP00065009692 |
FAST_1 |
PF06743 |
2e-23 |
3 |
ENSSSCP00065009698 |
FAST_2 |
PF08368 |
9.9e-18 |
1 |
ENSSSCP00065009698 |
FAST_1 |
PF06743 |
1.7e-23 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
TBRG4-203 |
ENSSSCT00065023805 |
2597 |
632aa |
ENSSSCP00065009692 |
TBRG4-202 |
ENSSSCT00065023810 |
1874 |
522aa |
ENSSSCP00065009695 |
TBRG4-201 |
ENSSSCT00065023815 |
2370 |
594aa |
ENSSSCP00065009698 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065022238 | 29.4118 | 16.9118 | sus_scrofa_berkshire | ENSSSCP00065009692 | 31.6456 | 18.1962 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065038121 | 27.4293 | 13.7761 | sus_scrofa_berkshire | ENSSSCP00065009692 | 35.2848 | 17.7215 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065004146 | 30.1435 | 15.311 | sus_scrofa_berkshire | ENSSSCP00065009692 | 39.8734 | 20.2532 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065031978 | 33.9623 | 16.9811 | sus_scrofa_berkshire | ENSSSCP00065009692 | 37.0253 | 18.5127 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065026982 | 35.7143 | 18.1677 | sus_scrofa_berkshire | ENSSSCP00065009692 | 36.3924 | 18.5127 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 100 | sus_scrofa | ENSSSCP00000017723 | 100 | 100 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 90.6646 | 90.1899 | sus_scrofa_usmarc | ENSSSCP00070025262 | 91.8269 | 91.3462 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 96.519 | 96.3608 | sus_scrofa_wuzhishan | ENSSSCP00005030465 | 100 | 99.8361 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 99.8418 | 99.6835 | sus_scrofa_jinhua | ENSSSCP00060002144 | 99.8418 | 99.6835 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055037025 | 100 | 100 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015000967 | 100 | 100 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035036156 | 100 | 100 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 99.8418 | 99.6835 | sus_scrofa_meishan | ENSSSCP00040008759 | 99.8418 | 99.6835 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 85.1266 | 77.5316 | equus_caballus | ENSECAP00000076353 | 79.7037 | 72.5926 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 86.7089 | 78.7975 | ovis_aries_rambouillet | ENSOARP00020003445 | 84.6986 | 76.9706 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025003844 | 100 | 100 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030019911 | 100 | 100 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 91.1392 | 89.557 | sus_scrofa_landrace | ENSSSCP00045037929 | 86.6165 | 85.1128 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 100 | 99.8418 | sus_scrofa_bamei | ENSSSCP00050022300 | 100 | 99.8418 |
ENSSSCG00065017921 | sus_scrofa_berkshire | ENSSSCP00065009692 | 92.7215 | 87.5 | bos_taurus | ENSBTAP00000013895 | 92.7215 | 87.5 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |