Description

Ensembl ID ENSSSCG00065017921 Gene ID Accession -
Symbol TBRG4 Alias - Full Name NA
Status Confidence Length 12057 bases Strand Minus strand
Position LUXW01048271.1 : 2925947 - 2938003 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065009695 RAP PF08373 5.5e-11 1
ENSSSCP00065009695 FAST_2 PF08368 4.7e-25 2
ENSSSCP00065009695 FAST_1 PF06743 1.5e-21 3
ENSSSCP00065009692 RAP PF08373 6.8e-11 1
ENSSSCP00065009692 FAST_2 PF08368 6.7e-25 2
ENSSSCP00065009692 FAST_1 PF06743 2e-23 3
ENSSSCP00065009698 FAST_2 PF08368 9.9e-18 1
ENSSSCP00065009698 FAST_1 PF06743 1.7e-23 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TBRG4-203 ENSSSCT00065023805 2597 632aa ENSSSCP00065009692
TBRG4-202 ENSSSCT00065023810 1874 522aa ENSSSCP00065009695
TBRG4-201 ENSSSCT00065023815 2370 594aa ENSSSCP00065009698

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006502223829.411816.9118sus_scrofa_berkshireENSSSCP0006500969231.645618.1962
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006503812127.429313.7761sus_scrofa_berkshireENSSSCP0006500969235.284817.7215
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500414630.143515.311sus_scrofa_berkshireENSSSCP0006500969239.873420.2532
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006503197833.962316.9811sus_scrofa_berkshireENSSSCP0006500969237.025318.5127
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006502698235.714318.1677sus_scrofa_berkshireENSSSCP0006500969236.392418.5127

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP00065009692100100sus_scrofaENSSSCP00000017723100100
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969290.664690.1899sus_scrofa_usmarcENSSSCP0007002526291.826991.3462
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969296.51996.3608sus_scrofa_wuzhishanENSSSCP0000503046510099.8361
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969299.841899.6835sus_scrofa_jinhuaENSSSCP0006000214499.841899.6835
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP00065009692100100sus_scrofa_pietrainENSSSCP00055037025100100
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP00065009692100100sus_scrofa_tibetanENSSSCP00015000967100100
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP00065009692100100sus_scrofa_hampshireENSSSCP00035036156100100
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969299.841899.6835sus_scrofa_meishanENSSSCP0004000875999.841899.6835
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969285.126677.5316equus_caballusENSECAP0000007635379.703772.5926
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969286.708978.7975ovis_aries_rambouilletENSOARP0002000344584.698676.9706
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP00065009692100100sus_scrofa_largewhiteENSSSCP00025003844100100
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP00065009692100100sus_scrofa_rongchangENSSSCP00030019911100100
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969291.139289.557sus_scrofa_landraceENSSSCP0004503792986.616585.1128
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969210099.8418sus_scrofa_bameiENSSSCP0005002230010099.8418
ENSSSCG00065017921sus_scrofa_berkshireENSSSCP0006500969292.721587.5bos_taurusENSBTAP0000001389592.721587.5

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression