Description

Ensembl ID ENSSSCG00065013388 Gene ID Accession -
Symbol FMR1 Alias - Full Name NA
Status Confidence Length 38492 bases Strand Minus strand
Position LUXW01005063.1 : 1218470 - 1256961 RNA binding domain Agenet , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065007417 Agenet PF05641 5.4e-11 1
ENSSSCP00065007417 KH_1 PF00013 2.8e-14 2
ENSSSCP00065007417 KH_1 PF00013 2.8e-14 3
ENSSSCP00065007417 KH_9 PF17904 3.9e-37 4
ENSSSCP00065007437 Agenet PF05641 7.4e-11 1
ENSSSCP00065007437 KH_1 PF00013 1.5e-15 2
ENSSSCP00065007437 KH_1 PF00013 1.5e-15 3
ENSSSCP00065007437 KH_9 PF17904 5e-37 4
ENSSSCP00065007437 FXMRP1_C_core PF12235 3.6e-24 5
ENSSSCP00065007390 Agenet PF05641 1e-10 1
ENSSSCP00065007390 KH_1 PF00013 1.9e-15 2
ENSSSCP00065007390 KH_1 PF00013 1.9e-15 3
ENSSSCP00065007390 KH_9 PF17904 6.1e-37 4
ENSSSCP00065007390 FXMRP1_C_core PF12235 7.5e-46 5
ENSSSCP00065007400 Agenet PF05641 1.1e-10 1
ENSSSCP00065007400 KH_1 PF00013 1.6e-15 2
ENSSSCP00065007400 KH_1 PF00013 1.6e-15 3
ENSSSCP00065007400 KH_9 PF17904 5.9e-37 4
ENSSSCP00065007400 FXMRP1_C_core PF12235 8.7e-46 5
ENSSSCP00065007425 KH_1 PF00013 1.4e-15 1
ENSSSCP00065007425 KH_1 PF00013 1.4e-15 2
ENSSSCP00065007425 KH_9 PF17904 4.4e-37 3
ENSSSCP00065007425 FXMRP1_C_core PF12235 2.3e-24 4
ENSSSCP00065007394 KH_1 PF00013 1.9e-15 1
ENSSSCP00065007394 KH_1 PF00013 1.9e-15 2
ENSSSCP00065007394 KH_9 PF17904 6.1e-37 3
ENSSSCP00065007394 FXMRP1_C_core PF12235 2.7e-46 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
FMR1-202 ENSSSCT00065018091 3736 611aa ENSSSCP00065007390
FMR1-201 ENSSSCT00065018103 3627 597aa ENSSSCP00065007394
FMR1-203 ENSSSCT00065018113 2536 632aa ENSSSCP00065007400
FMR1-204 ENSSSCT00065018151 2265 537aa ENSSSCP00065007417
FMR1-205 ENSSSCT00065018175 2541 501aa ENSSSCP00065007425
FMR1-206 ENSSSCT00065018193 1827 537aa ENSSSCP00065007437

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006503014955.524545.5944sus_scrofa_berkshireENSSSCP0006500740062.816551.5823
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006504011362.629253.4712sus_scrofa_berkshireENSSSCP0006500740067.088657.2785

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP00065007400100100sus_scrofaENSSSCP00000030836100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP00065007400100100sus_scrofa_usmarcENSSSCP00070006270100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740098.101398.1013sus_scrofa_wuzhishanENSSSCP0000504634098.256798.2567
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740096.677296.6772sus_scrofa_jinhuaENSSSCP00060027046100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740096.677296.6772sus_scrofa_pietrainENSSSCP00055001589100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740096.677296.6772sus_scrofa_tibetanENSSSCP00015017480100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740096.677296.6772sus_scrofa_hampshireENSSSCP00035031726100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740094.46294.462sus_scrofa_meishanENSSSCP00040027987100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740099.367199.0506equus_caballusENSECAP0000004669199.367199.0506
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740091.772187.3418ovis_aries_rambouilletENSOARP0002001245179.889876.0331
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740096.677296.6772sus_scrofa_largewhiteENSSSCP00025040544100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP00065007400100100sus_scrofa_rongchangENSSSCP00030001010100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740096.677296.6772sus_scrofa_landraceENSSSCP00045004079100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP00065007400100100sus_scrofa_bameiENSSSCP00050043355100100
ENSSSCG00065013388sus_scrofa_berkshireENSSSCP0006500740099.208997.3101bos_taurusENSBTAP0000005854699.208997.3101

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression