RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065010464 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
5853 bases |
Strand |
Plus strand |
Position |
LUXW01007746.1 : 319183 - 325035 |
RNA binding domain |
Ribosomal_S4e , KOW , RS4NT , S4 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065005662 |
Ribosomal_S4e |
PF00900 |
5.4e-38 |
1 |
ENSSSCP00065005662 |
KOW |
PF00467 |
2.5e-05 |
2 |
ENSSSCP00065005662 |
RS4NT |
PF08071 |
6.2e-21 |
3 |
ENSSSCP00065005662 |
S4 |
PF01479 |
1.2e-05 |
4 |
ENSSSCP00065005670 |
Ribosomal_S4e |
PF00900 |
5.4e-38 |
1 |
ENSSSCP00065005670 |
KOW |
PF00467 |
2.5e-05 |
2 |
ENSSSCP00065005670 |
RS4NT |
PF08071 |
6.2e-21 |
3 |
ENSSSCP00065005670 |
S4 |
PF01479 |
1.2e-05 |
4 |
ENSSSCP00065005668 |
Ribosomal_S4e |
PF00900 |
1.2e-37 |
1 |
ENSSSCP00065005668 |
KOW |
PF00467 |
2.1e-05 |
2 |
ENSSSCP00065005668 |
RS4NT |
PF08071 |
7.8e-21 |
3 |
ENSSSCP00065005668 |
S4 |
PF01479 |
1e-05 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00065013891 |
1400 |
263aa |
ENSSSCP00065005662 |
- |
ENSSSCT00065013903 |
1405 |
242aa |
ENSSSCP00065005668 |
- |
ENSSSCT00065013907 |
1373 |
263aa |
ENSSSCP00065005670 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065010464 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa | ENSSSCP00000066710 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa_usmarc | ENSSSCP00070047907 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa_wuzhishan | ENSSSCP00005016112 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060017997 | 100 | 100 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa_pietrain | ENSSSCP00055009682 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa_tibetan | ENSSSCP00015000181 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035020943 | 100 | 100 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.2395 | sus_scrofa_meishan | ENSSSCP00040022692 | 99.6198 | 99.2395 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 92.3954 | 88.5932 | equus_caballus | ENSECAP00000075407 | 72.7545 | 69.7605 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 69.5817 | 63.8783 | equus_caballus | ENSECAP00000077403 | 82.8054 | 76.0181 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 87.8327 | 87.4525 | equus_caballus | ENSECAP00000023810 | 97.4684 | 97.0464 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 96.9582 | 93.1559 | equus_caballus | ENSECAP00000002215 | 96.9582 | 93.1559 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 95.057 | 93.9164 | ovis_aries_rambouillet | ENSOARP00020025309 | 95.057 | 93.9164 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 97.7186 | 97.7186 | ovis_aries_rambouillet | ENSOARP00020010495 | 96.2547 | 96.2547 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.2395 | 98.8593 | ovis_aries_rambouillet | ENSOARP00020030906 | 99.2395 | 98.8593 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | ovis_aries_rambouillet | ENSOARP00020032857 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa_largewhite | ENSSSCP00025043216 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | sus_scrofa_rongchang | ENSSSCP00030031689 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045009887 | 100 | 100 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 100 | 99.6198 | sus_scrofa_bamei | ENSSSCP00050039364 | 100 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.2395 | 98.8593 | bos_taurus | ENSBTAP00000052226 | 99.2395 | 98.8593 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 95.8175 | 94.6768 | bos_taurus | ENSBTAP00000057163 | 95.8175 | 94.6768 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 96.5779 | 95.8175 | bos_taurus | ENSBTAP00000055974 | 96.5779 | 95.8175 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 98.0989 | 98.0989 | bos_taurus | ENSBTAP00000051734 | 98.0989 | 98.0989 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 96.9582 | 94.6768 | bos_taurus | ENSBTAP00000050594 | 96.9582 | 94.6768 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 99.6198 | 99.6198 | bos_taurus | ENSBTAP00000025024 | 99.6198 | 99.6198 |
ENSSSCG00065010464 | sus_scrofa_berkshire | ENSSSCP00065005662 | 98.0989 | 98.0989 | bos_taurus | ENSBTAP00000055366 | 98.4733 | 98.4733 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |