Description

Ensembl ID ENSSSCG00065010464 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5853 bases Strand Plus strand
Position LUXW01007746.1 : 319183 - 325035 RNA binding domain Ribosomal_S4e , KOW , RS4NT , S4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065005662 Ribosomal_S4e PF00900 5.4e-38 1
ENSSSCP00065005662 KOW PF00467 2.5e-05 2
ENSSSCP00065005662 RS4NT PF08071 6.2e-21 3
ENSSSCP00065005662 S4 PF01479 1.2e-05 4
ENSSSCP00065005670 Ribosomal_S4e PF00900 5.4e-38 1
ENSSSCP00065005670 KOW PF00467 2.5e-05 2
ENSSSCP00065005670 RS4NT PF08071 6.2e-21 3
ENSSSCP00065005670 S4 PF01479 1.2e-05 4
ENSSSCP00065005668 Ribosomal_S4e PF00900 1.2e-37 1
ENSSSCP00065005668 KOW PF00467 2.1e-05 2
ENSSSCP00065005668 RS4NT PF08071 7.8e-21 3
ENSSSCP00065005668 S4 PF01479 1e-05 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00065013891 1400 263aa ENSSSCP00065005662
- ENSSSCT00065013903 1405 242aa ENSSSCP00065005668
- ENSSSCT00065013907 1373 263aa ENSSSCP00065005670

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065010464

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofaENSSSCP0000006671099.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofa_usmarcENSSSCP0007004790799.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofa_wuzhishanENSSSCP0000501611299.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP00065005662100100sus_scrofa_jinhuaENSSSCP00060017997100100
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofa_pietrainENSSSCP0005500968299.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofa_tibetanENSSSCP0001500018199.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP00065005662100100sus_scrofa_hampshireENSSSCP00035020943100100
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.2395sus_scrofa_meishanENSSSCP0004002269299.619899.2395
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566292.395488.5932equus_caballusENSECAP0000007540772.754569.7605
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566269.581763.8783equus_caballusENSECAP0000007740382.805476.0181
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566287.832787.4525equus_caballusENSECAP0000002381097.468497.0464
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566296.958293.1559equus_caballusENSECAP0000000221596.958293.1559
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566295.05793.9164ovis_aries_rambouilletENSOARP0002002530995.05793.9164
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566297.718697.7186ovis_aries_rambouilletENSOARP0002001049596.254796.2547
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.239598.8593ovis_aries_rambouilletENSOARP0002003090699.239598.8593
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198ovis_aries_rambouilletENSOARP0002003285799.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofa_largewhiteENSSSCP0002504321699.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198sus_scrofa_rongchangENSSSCP0003003168999.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP00065005662100100sus_scrofa_landraceENSSSCP00045009887100100
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566210099.6198sus_scrofa_bameiENSSSCP0005003936410099.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.239598.8593bos_taurusENSBTAP0000005222699.239598.8593
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566295.817594.6768bos_taurusENSBTAP0000005716395.817594.6768
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566296.577995.8175bos_taurusENSBTAP0000005597496.577995.8175
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566298.098998.0989bos_taurusENSBTAP0000005173498.098998.0989
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566296.958294.6768bos_taurusENSBTAP0000005059496.958294.6768
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566299.619899.6198bos_taurusENSBTAP0000002502499.619899.6198
ENSSSCG00065010464sus_scrofa_berkshireENSSSCP0006500566298.098998.0989bos_taurusENSBTAP0000005536698.473398.4733

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression