RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00065009135 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
30116 bases |
Strand |
Plus strand |
Position |
LUXW01008262.1 : 1733953 - 1764068 |
RNA binding domain |
DEAD , HA2 , OB_NTP_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00065004959 |
DEAD |
PF00270 |
5.7e-07 |
1 |
ENSSSCP00065004959 |
HA2 |
PF04408 |
2.4e-14 |
2 |
ENSSSCP00065004959 |
OB_NTP_bind |
PF07717 |
1.2e-12 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00065012173 |
5387 |
1146aa |
ENSSSCP00065004959 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065045272 | 43.9946 | 24.9663 | sus_scrofa_berkshire | ENSSSCP00065004959 | 28.4468 | 16.1431 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065006585 | 20.1362 | 9.53307 | sus_scrofa_berkshire | ENSSSCP00065004959 | 18.0628 | 8.55148 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065035950 | 27.5018 | 17.0626 | sus_scrofa_berkshire | ENSSSCP00065004959 | 33.3333 | 20.6806 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065033254 | 38.834 | 25.0988 | sus_scrofa_berkshire | ENSSSCP00065004959 | 34.2932 | 22.164 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065035308 | 45.0578 | 27.8562 | sus_scrofa_berkshire | ENSSSCP00065004959 | 30.6283 | 18.9354 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065002254 | 32.4176 | 19.6232 | sus_scrofa_berkshire | ENSSSCP00065004959 | 36.0384 | 21.815 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065009339 | 49.6444 | 29.7297 | sus_scrofa_berkshire | ENSSSCP00065004959 | 30.4538 | 18.2373 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065031844 | 35.4991 | 22.5989 | sus_scrofa_berkshire | ENSSSCP00065004959 | 32.897 | 20.9424 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065000152 | 33.3333 | 20.938 | sus_scrofa_berkshire | ENSSSCP00065004959 | 34.7295 | 21.815 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065034782 | 34.456 | 21.848 | sus_scrofa_berkshire | ENSSSCP00065004959 | 34.8168 | 22.0768 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065018010 | 32.5998 | 19.8859 | sus_scrofa_berkshire | ENSSSCP00065004959 | 34.904 | 21.2914 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065023025 | 45.6604 | 29.5597 | sus_scrofa_berkshire | ENSSSCP00065004959 | 31.6754 | 20.5061 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065032842 | 41.5042 | 25.766 | sus_scrofa_berkshire | ENSSSCP00065004959 | 26.0035 | 16.1431 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065009108 | 22.236 | 14.5342 | sus_scrofa_berkshire | ENSSSCP00065004959 | 15.6195 | 10.2094 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065041977 | 34.6535 | 20.6271 | sus_scrofa_berkshire | ENSSSCP00065004959 | 36.6492 | 21.815 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065009614 | 48.9164 | 32.5077 | sus_scrofa_berkshire | ENSSSCP00065004959 | 27.5742 | 18.3246 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065016609 | 31.552 | 19.5461 | sus_scrofa_berkshire | ENSSSCP00065004959 | 37.6091 | 23.2984 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065006176 | 31.5595 | 19.8817 | sus_scrofa_berkshire | ENSSSCP00065004959 | 37.26 | 23.4729 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 94.0663 | 93.8045 | sus_scrofa | ENSSSCP00000037302 | 98.1785 | 97.9053 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.9127 | 99.7382 | sus_scrofa_usmarc | ENSSSCP00070047887 | 99.9127 | 99.7382 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.2147 | 99.0401 | sus_scrofa_wuzhishan | ENSSSCP00005011527 | 99.2147 | 99.0401 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 100 | 99.8255 | sus_scrofa_jinhua | ENSSSCP00060041956 | 100 | 99.8255 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.9127 | 99.9127 | sus_scrofa_pietrain | ENSSSCP00055008567 | 99.8256 | 99.8256 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.9127 | 99.8255 | sus_scrofa_tibetan | ENSSSCP00015001613 | 99.9127 | 99.8255 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.8255 | 99.7382 | sus_scrofa_hampshire | ENSSSCP00035030818 | 99.8255 | 99.7382 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 100 | 99.8255 | sus_scrofa_meishan | ENSSSCP00040038564 | 100 | 99.8255 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 89.267 | 82.548 | equus_caballus | ENSECAP00000009309 | 89.1892 | 82.476 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 90.2269 | 83.8569 | ovis_aries_rambouillet | ENSOARP00020015544 | 90.1482 | 83.7838 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 90.7504 | 90.6632 | sus_scrofa_largewhite | ENSSSCP00025007227 | 99.7124 | 99.6165 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.8255 | 99.7382 | sus_scrofa_rongchang | ENSSSCP00030032413 | 99.8255 | 99.7382 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 99.8255 | 99.5637 | sus_scrofa_landrace | ENSSSCP00045041341 | 99.8255 | 99.5637 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 100 | 99.8255 | sus_scrofa_bamei | ENSSSCP00050006668 | 100 | 99.8255 |
ENSSSCG00065009135 | sus_scrofa_berkshire | ENSSSCP00065004959 | 89.8778 | 83.6824 | bos_taurus | ENSBTAP00000008999 | 89.8778 | 83.6824 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |