Description

Ensembl ID ENSSSCG00065001974 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 1016 bases Strand Minus strand
Position LUXW01007799.1 : 1103535 - 1104550 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00065000834 LSM PF01423 4.2e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00065002470 354 117aa ENSSSCP00065000834

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006503356027.868925sus_scrofa_berkshireENSSSCP0006500083458.119752.1368
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006502917324.427523.6641sus_scrofa_berkshireENSSSCP0006500083454.700952.9915

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofaENSSSCP00000053209100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006500083458.974456.4103sus_scrofa_usmarcENSSSCP0007003280444.516142.5806
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006500083461.538558.9744sus_scrofa_wuzhishanENSSSCP0000502548625.087124.0418
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006500083499.145399.1453sus_scrofa_jinhuaENSSSCP0006000145299.145399.1453
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofa_pietrainENSSSCP00055036125100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006500083410099.1453sus_scrofa_tibetanENSSSCP0001500214510099.1453
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofa_hampshireENSSSCP00035023112100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofa_meishanENSSSCP00040011384100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006500083436.752132.4786ovis_aries_rambouilletENSOARP0002002368264.179156.7164
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofa_largewhiteENSSSCP00025000615100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofa_rongchangENSSSCP00030012066100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP00065000834100100sus_scrofa_landraceENSSSCP00045003730100100
ENSSSCG00065001974sus_scrofa_berkshireENSSSCP0006500083439.316231.6239bos_taurusENSBTAP0000007050262.162250

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression