Description

Ensembl ID ENSSSCG00060075143 Gene ID Accession -
Symbol SRP54 Alias - Full Name NA
Status Confidence Length 47699 bases Strand Minus strand
Position LUXY01110831.1 : 2577168 - 2624866 RNA binding domain SRP54 , SRP54_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060044930 SRP54 PF00448 2.5e-78 1
ENSSSCP00060044962 SRP54 PF00448 3.5e-78 1
ENSSSCP00060044962 SRP54_N PF02881 4.5e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SRP54-201 ENSSSCT00060103036 2545 455aa ENSSSCP00060044930
SRP54-202 ENSSSCT00060103094 2872 504aa ENSSSCP00060044962

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP0006000444931.34815.8307sus_scrofa_jinhuaENSSSCP0006004496239.682520.0397

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_usmarcENSSSCP00070011505100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofaENSSSCP00000002136100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP0006004496299.007998.6111equus_caballusENSECAP0000001603098.422198.0276
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_berkshireENSSSCP00065037682100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100ovis_aries_rambouilletENSOARP00020008430100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_landraceENSSSCP00045010914100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_bameiENSSSCP00050003427100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_rongchangENSSSCP00030038427100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_tibetanENSSSCP00015031822100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_wuzhishanENSSSCP00005043582100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_hampshireENSSSCP00035043946100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_meishanENSSSCP00040021021100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100bos_taurusENSBTAP00000025405100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_pietrainENSSSCP00055027174100100
ENSSSCG00060075143sus_scrofa_jinhuaENSSSCP00060044962100100sus_scrofa_largewhiteENSSSCP00025042304100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression