RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060075143 | Gene ID |
|
Accession |
- |
Symbol |
SRP54 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
47699 bases |
Strand |
Minus strand |
Position |
LUXY01110831.1 : 2577168 - 2624866 |
RNA binding domain |
SRP54 , SRP54_N |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060044930 |
SRP54 |
PF00448 |
2.5e-78 |
1 |
ENSSSCP00060044962 |
SRP54 |
PF00448 |
3.5e-78 |
1 |
ENSSSCP00060044962 |
SRP54_N |
PF02881 |
4.5e-20 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
SRP54-201 |
ENSSSCT00060103036 |
2545 |
455aa |
ENSSSCP00060044930 |
SRP54-202 |
ENSSSCT00060103094 |
2872 |
504aa |
ENSSSCP00060044962 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060004449 | 31.348 | 15.8307 | sus_scrofa_jinhua | ENSSSCP00060044962 | 39.6825 | 20.0397 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070011505 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa | ENSSSCP00000002136 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 99.0079 | 98.6111 | equus_caballus | ENSECAP00000016030 | 98.4221 | 98.0276 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065037682 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | ovis_aries_rambouillet | ENSOARP00020008430 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045010914 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050003427 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030038427 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015031822 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005043582 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035043946 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040021021 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | bos_taurus | ENSBTAP00000025405 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055027174 | 100 | 100 |
ENSSSCG00060075143 | sus_scrofa_jinhua | ENSSSCP00060044962 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025042304 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |