RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060074917 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
30401 bases |
Strand |
Plus strand |
Position |
LUXY01103247.1 : 5631 - 36031 |
RNA binding domain |
CPSF_A |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060044818 |
CPSF_A |
PF03178 |
2.2e-86 |
1 |
ENSSSCP00060044706 |
CPSF_A |
PF03178 |
2.6e-86 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00060102556 |
4220 |
1112aa |
ENSSSCP00060044706 |
- |
ENSSSCT00060102787 |
4724 |
1156aa |
ENSSSCP00060044818 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060003459 | 39.0304 | 21.6105 | sus_scrofa_jinhua | ENSSSCP00060044818 | 41.09 | 22.7509 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060008762 | 38 | 22 | sus_scrofa_jinhua | ENSSSCP00060044818 | 6.57439 | 3.80623 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.9723 | 96.6263 | sus_scrofa_usmarc | ENSSSCP00070042793 | 98.3333 | 97.9825 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.8858 | 96.5398 | sus_scrofa | ENSSSCP00000013928 | 98.3319 | 97.9807 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.6263 | 96.1938 | equus_caballus | ENSECAP00000074581 | 86.8585 | 86.4697 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065048060 | 100 | 100 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 97.1453 | 96.3668 | ovis_aries_rambouillet | ENSOARP00020015969 | 90.6376 | 89.9112 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 99.9135 | 99.9135 | sus_scrofa_landrace | ENSSSCP00045044219 | 99.9135 | 99.9135 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 99.9135 | 99.9135 | sus_scrofa_bamei | ENSSSCP00050027326 | 99.9135 | 99.9135 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030039496 | 100 | 100 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.9723 | 96.6263 | sus_scrofa_tibetan | ENSSSCP00015009078 | 86.6976 | 86.3882 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.1938 | 95.7612 | sus_scrofa_wuzhishan | ENSSSCP00005023140 | 98.1465 | 97.7052 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 99.9135 | 99.9135 | sus_scrofa_hampshire | ENSSSCP00035030499 | 99.9135 | 99.9135 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040034287 | 100 | 100 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.9723 | 96.3668 | bos_taurus | ENSBTAP00000028740 | 91.6599 | 91.0875 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 99.9135 | 99.9135 | sus_scrofa_pietrain | ENSSSCP00055007619 | 99.9135 | 99.9135 |
ENSSSCG00060074917 | sus_scrofa_jinhua | ENSSSCP00060044818 | 96.9723 | 96.6263 | sus_scrofa_largewhite | ENSSSCP00025048598 | 98.3333 | 97.9825 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |