Description

Ensembl ID ENSSSCG00060074917 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 30401 bases Strand Plus strand
Position LUXY01103247.1 : 5631 - 36031 RNA binding domain CPSF_A
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060044818 CPSF_A PF03178 2.2e-86 1
ENSSSCP00060044706 CPSF_A PF03178 2.6e-86 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00060102556 4220 1112aa ENSSSCP00060044706
- ENSSSCT00060102787 4724 1156aa ENSSSCP00060044818

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006000345939.030421.6105sus_scrofa_jinhuaENSSSCP0006004481841.0922.7509
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP000600087623822sus_scrofa_jinhuaENSSSCP000600448186.574393.80623

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.972396.6263sus_scrofa_usmarcENSSSCP0007004279398.333397.9825
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.885896.5398sus_scrofaENSSSCP0000001392898.331997.9807
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.626396.1938equus_caballusENSECAP0000007458186.858586.4697
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP00060044818100100sus_scrofa_berkshireENSSSCP00065048060100100
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481897.145396.3668ovis_aries_rambouilletENSOARP0002001596990.637689.9112
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481899.913599.9135sus_scrofa_landraceENSSSCP0004504421999.913599.9135
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481899.913599.9135sus_scrofa_bameiENSSSCP0005002732699.913599.9135
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP00060044818100100sus_scrofa_rongchangENSSSCP00030039496100100
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.972396.6263sus_scrofa_tibetanENSSSCP0001500907886.697686.3882
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.193895.7612sus_scrofa_wuzhishanENSSSCP0000502314098.146597.7052
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481899.913599.9135sus_scrofa_hampshireENSSSCP0003503049999.913599.9135
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP00060044818100100sus_scrofa_meishanENSSSCP00040034287100100
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.972396.3668bos_taurusENSBTAP0000002874091.659991.0875
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481899.913599.9135sus_scrofa_pietrainENSSSCP0005500761999.913599.9135
ENSSSCG00060074917sus_scrofa_jinhuaENSSSCP0006004481896.972396.6263sus_scrofa_largewhiteENSSSCP0002504859898.333397.9825

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression