Description

Ensembl ID ENSSSCG00060053490 Gene ID Accession -
Symbol RPLP0 Alias - Full Name Sus scrofa ribosomal protein lateral stalk subunit P0 (RPLP0), mRNA.
Status Confidence Length 4784 bases Strand Plus strand
Position LUXY01000873.1 : 96559 - 101342 RNA binding domain Ribosomal_L10 , Ribosomal_60s
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060031422 Ribosomal_L10 PF00466 7.5e-21 1
ENSSSCP00060031422 Ribosomal_60s PF00428 1.7e-20 2
ENSSSCP00060031420 Ribosomal_L10 PF00466 1.2e-20 1
ENSSSCP00060031420 Ribosomal_60s PF00428 2.5e-20 2
ENSSSCP00060031432 Ribosomal_L10 PF00466 1.5e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RPLP0-201 ENSSSCT00060072858 1127 318aa ENSSSCP00060031420
RPLP0-202 ENSSSCT00060072864 941 256aa ENSSSCP00060031422
RPLP0-203 ENSSSCT00060072889 1105 319aa ENSSSCP00060031432

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006002436724.666712.6667sus_scrofa_jinhuaENSSSCP0006003143211.59875.95611
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006001707828.225815.3226sus_scrofa_jinhuaENSSSCP0006003143210.97185.95611
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006004243033.043514.7826sus_scrofa_jinhuaENSSSCP0006003143211.91225.32915
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006000739026.950414.1844sus_scrofa_jinhuaENSSSCP0006003143211.91226.26959
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003751625.781211.7188sus_scrofa_jinhuaENSSSCP0006003143210.34484.70219
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006004275432.407416.6667sus_scrofa_jinhuaENSSSCP0006003143210.97185.64263
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006000938519.653210.9827sus_scrofa_jinhuaENSSSCP0006003143210.65835.95611

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143288.714785.2665sus_scrofa_usmarcENSSSCP0007001140488.993785.5346
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143288.714785.2665sus_scrofaENSSSCP0000004450688.993785.5346
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143298.746198.7461sus_scrofa_berkshireENSSSCP0006501694797.826197.8261
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143289.028285.2665ovis_aries_rambouilletENSOARP0002002709889.308285.5346
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143298.746198.7461sus_scrofa_landraceENSSSCP0004500470297.826197.8261
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143298.746198.7461sus_scrofa_bameiENSSSCP0005000799797.826197.8261
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143298.746198.7461sus_scrofa_rongchangENSSSCP0003001175497.826197.8261
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143299.686599.6865sus_scrofa_tibetanENSSSCP0001502992699.686599.6865
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143287.774384.326sus_scrofa_wuzhishanENSSSCP0000504525988.888985.3968
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143288.714785.2665sus_scrofa_hampshireENSSSCP0003501984488.993785.5346
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143276.802573.3542sus_scrofa_meishanENSSSCP0004004712187.813683.871
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143289.028285.2665bos_taurusENSBTAP0000004818389.308285.5346
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP0006003143298.746198.7461sus_scrofa_pietrainENSSSCP0005502142697.826197.8261
ENSSSCG00060053490sus_scrofa_jinhuaENSSSCP00060031432100100sus_scrofa_largewhiteENSSSCP00025028029100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression