RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060053490 | Gene ID |
|
Accession |
- |
Symbol |
RPLP0 |
Alias |
- |
Full Name |
Sus scrofa ribosomal protein lateral stalk subunit P0 (RPLP0), mRNA. |
Status |
Confidence |
Length |
4784 bases |
Strand |
Plus strand |
Position |
LUXY01000873.1 : 96559 - 101342 |
RNA binding domain |
Ribosomal_L10 , Ribosomal_60s |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060031422 |
Ribosomal_L10 |
PF00466 |
7.5e-21 |
1 |
ENSSSCP00060031422 |
Ribosomal_60s |
PF00428 |
1.7e-20 |
2 |
ENSSSCP00060031420 |
Ribosomal_L10 |
PF00466 |
1.2e-20 |
1 |
ENSSSCP00060031420 |
Ribosomal_60s |
PF00428 |
2.5e-20 |
2 |
ENSSSCP00060031432 |
Ribosomal_L10 |
PF00466 |
1.5e-20 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
RPLP0-201 |
ENSSSCT00060072858 |
1127 |
318aa |
ENSSSCP00060031420 |
RPLP0-202 |
ENSSSCT00060072864 |
941 |
256aa |
ENSSSCP00060031422 |
RPLP0-203 |
ENSSSCT00060072889 |
1105 |
319aa |
ENSSSCP00060031432 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060024367 | 24.6667 | 12.6667 | sus_scrofa_jinhua | ENSSSCP00060031432 | 11.5987 | 5.95611 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060017078 | 28.2258 | 15.3226 | sus_scrofa_jinhua | ENSSSCP00060031432 | 10.9718 | 5.95611 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060042430 | 33.0435 | 14.7826 | sus_scrofa_jinhua | ENSSSCP00060031432 | 11.9122 | 5.32915 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060007390 | 26.9504 | 14.1844 | sus_scrofa_jinhua | ENSSSCP00060031432 | 11.9122 | 6.26959 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060037516 | 25.7812 | 11.7188 | sus_scrofa_jinhua | ENSSSCP00060031432 | 10.3448 | 4.70219 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060042754 | 32.4074 | 16.6667 | sus_scrofa_jinhua | ENSSSCP00060031432 | 10.9718 | 5.64263 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060009385 | 19.6532 | 10.9827 | sus_scrofa_jinhua | ENSSSCP00060031432 | 10.6583 | 5.95611 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 88.7147 | 85.2665 | sus_scrofa_usmarc | ENSSSCP00070011404 | 88.9937 | 85.5346 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 88.7147 | 85.2665 | sus_scrofa | ENSSSCP00000044506 | 88.9937 | 85.5346 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 98.7461 | 98.7461 | sus_scrofa_berkshire | ENSSSCP00065016947 | 97.8261 | 97.8261 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 89.0282 | 85.2665 | ovis_aries_rambouillet | ENSOARP00020027098 | 89.3082 | 85.5346 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 98.7461 | 98.7461 | sus_scrofa_landrace | ENSSSCP00045004702 | 97.8261 | 97.8261 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 98.7461 | 98.7461 | sus_scrofa_bamei | ENSSSCP00050007997 | 97.8261 | 97.8261 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 98.7461 | 98.7461 | sus_scrofa_rongchang | ENSSSCP00030011754 | 97.8261 | 97.8261 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 99.6865 | 99.6865 | sus_scrofa_tibetan | ENSSSCP00015029926 | 99.6865 | 99.6865 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 87.7743 | 84.326 | sus_scrofa_wuzhishan | ENSSSCP00005045259 | 88.8889 | 85.3968 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 88.7147 | 85.2665 | sus_scrofa_hampshire | ENSSSCP00035019844 | 88.9937 | 85.5346 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 76.8025 | 73.3542 | sus_scrofa_meishan | ENSSSCP00040047121 | 87.8136 | 83.871 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 89.0282 | 85.2665 | bos_taurus | ENSBTAP00000048183 | 89.3082 | 85.5346 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 98.7461 | 98.7461 | sus_scrofa_pietrain | ENSSSCP00055021426 | 97.8261 | 97.8261 |
ENSSSCG00060053490 | sus_scrofa_jinhua | ENSSSCP00060031432 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025028029 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |