RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060047029 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
94212 bases |
Strand |
Plus strand |
Position |
LUXY01070383.1 : 1153474 - 1247685 |
RNA binding domain |
BDHCT , DEAD , HRDC |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060027404 |
BDHCT |
PF08072 |
2.4e-21 |
1 |
ENSSSCP00060027404 |
DEAD |
PF00270 |
8.1e-16 |
2 |
ENSSSCP00060027404 |
HRDC |
PF00570 |
8.5e-12 |
3 |
ENSSSCP00060027409 |
BDHCT |
PF08072 |
2.7e-21 |
1 |
ENSSSCP00060027409 |
DEAD |
PF00270 |
4.7e-20 |
2 |
ENSSSCP00060027409 |
HRDC |
PF00570 |
7.8e-12 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00060063871 |
4287 |
1369aa |
ENSSSCP00060027404 |
- |
ENSSSCT00060063886 |
5116 |
1316aa |
ENSSSCP00060027409 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060026188 | 29.2633 | 15.2797 | sus_scrofa_jinhua | ENSSSCP00060027404 | 31.3367 | 16.3623 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060042887 | 52.0801 | 33.1279 | sus_scrofa_jinhua | ENSSSCP00060027404 | 24.6896 | 15.7049 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060020343 | 33.9104 | 22.8106 | sus_scrofa_jinhua | ENSSSCP00060027404 | 24.3243 | 16.3623 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 99.4887 | 99.4156 | sus_scrofa_usmarc | ENSSSCP00070028120 | 95.3782 | 95.3081 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 100 | 100 | sus_scrofa | ENSSSCP00000001986 | 95.6006 | 95.6006 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 90.1388 | 85.0256 | equus_caballus | ENSECAP00000068873 | 84.9862 | 80.1653 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 99.927 | 99.7809 | sus_scrofa_berkshire | ENSSSCP00065023741 | 99.927 | 99.7809 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 90.2849 | 84.2951 | ovis_aries_rambouillet | ENSOARP00020022294 | 86.494 | 80.7558 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 99.4887 | 99.4887 | sus_scrofa_landrace | ENSSSCP00045038501 | 95.3782 | 95.3782 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 100 | 99.927 | sus_scrofa_bamei | ENSSSCP00050037895 | 100 | 99.927 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030043714 | 100 | 100 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 99.927 | 99.8539 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.5307 | 95.4609 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 100 | 99.927 | sus_scrofa_wuzhishan | ENSSSCP00005008326 | 95.6006 | 95.5307 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 97.5164 | 97.4434 | sus_scrofa_hampshire | ENSSSCP00035027742 | 97.0203 | 96.9477 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 100 | 99.927 | sus_scrofa_meishan | ENSSSCP00040001557 | 100 | 99.927 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 82.9072 | 77.721 | bos_taurus | ENSBTAP00000027057 | 86.1807 | 80.7897 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055024511 | 100 | 100 |
ENSSSCG00060047029 | sus_scrofa_jinhua | ENSSSCP00060027404 | 97.5164 | 97.4434 | sus_scrofa_largewhite | ENSSSCP00025036768 | 97.0203 | 96.9477 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |