Description

Ensembl ID ENSSSCG00060047029 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 94212 bases Strand Plus strand
Position LUXY01070383.1 : 1153474 - 1247685 RNA binding domain BDHCT , DEAD , HRDC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060027404 BDHCT PF08072 2.4e-21 1
ENSSSCP00060027404 DEAD PF00270 8.1e-16 2
ENSSSCP00060027404 HRDC PF00570 8.5e-12 3
ENSSSCP00060027409 BDHCT PF08072 2.7e-21 1
ENSSSCP00060027409 DEAD PF00270 4.7e-20 2
ENSSSCP00060027409 HRDC PF00570 7.8e-12 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00060063871 4287 1369aa ENSSSCP00060027404
- ENSSSCT00060063886 5116 1316aa ENSSSCP00060027409

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002618829.263315.2797sus_scrofa_jinhuaENSSSCP0006002740431.336716.3623
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006004288752.080133.1279sus_scrofa_jinhuaENSSSCP0006002740424.689615.7049
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002034333.910422.8106sus_scrofa_jinhuaENSSSCP0006002740424.324316.3623

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740499.488799.4156sus_scrofa_usmarcENSSSCP0007002812095.378295.3081
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP00060027404100100sus_scrofaENSSSCP0000000198695.600695.6006
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740490.138885.0256equus_caballusENSECAP0000006887384.986280.1653
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740499.92799.7809sus_scrofa_berkshireENSSSCP0006502374199.92799.7809
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740490.284984.2951ovis_aries_rambouilletENSOARP0002002229486.49480.7558
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740499.488799.4887sus_scrofa_landraceENSSSCP0004503850195.378295.3782
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740410099.927sus_scrofa_bameiENSSSCP0005003789510099.927
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP00060027404100100sus_scrofa_rongchangENSSSCP00030043714100100
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740499.92799.8539sus_scrofa_tibetanENSSSCP0001504503095.530795.4609
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740410099.927sus_scrofa_wuzhishanENSSSCP0000500832695.600695.5307
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740497.516497.4434sus_scrofa_hampshireENSSSCP0003502774297.020396.9477
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740410099.927sus_scrofa_meishanENSSSCP0004000155710099.927
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740482.907277.721bos_taurusENSBTAP0000002705786.180780.7897
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP00060027404100100sus_scrofa_pietrainENSSSCP00055024511100100
ENSSSCG00060047029sus_scrofa_jinhuaENSSSCP0006002740497.516497.4434sus_scrofa_largewhiteENSSSCP0002503676897.020396.9477

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression