RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060045040 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
127715 bases |
Strand |
Plus strand |
Position |
LUXY01074716.1 : 1638170 - 1765884 |
RNA binding domain |
DEAD , DNA_pol_A_exo1 , HRDC |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060026183 |
DEAD |
PF00270 |
2.8e-16 |
1 |
ENSSSCP00060026183 |
DNA_pol_A_exo1 |
PF01612 |
2.5e-25 |
2 |
ENSSSCP00060026183 |
HRDC |
PF00570 |
4.5e-12 |
3 |
ENSSSCP00060026173 |
DEAD |
PF00270 |
2.9e-16 |
1 |
ENSSSCP00060026173 |
DNA_pol_A_exo1 |
PF01612 |
1.5e-35 |
2 |
ENSSSCP00060026173 |
HRDC |
PF00570 |
4.6e-12 |
3 |
ENSSSCP00060026181 |
DEAD |
PF00270 |
3.2e-16 |
1 |
ENSSSCP00060026181 |
DNA_pol_A_exo1 |
PF01612 |
1.6e-35 |
2 |
ENSSSCP00060026181 |
HRDC |
PF00570 |
4.9e-12 |
3 |
ENSSSCP00060026185 |
DEAD |
PF00270 |
3.5e-16 |
1 |
ENSSSCP00060026185 |
DNA_pol_A_exo1 |
PF01612 |
1.7e-35 |
2 |
ENSSSCP00060026185 |
HRDC |
PF00570 |
5.1e-12 |
3 |
ENSSSCP00060026175 |
DEAD |
PF00270 |
3.5e-16 |
1 |
ENSSSCP00060026175 |
DNA_pol_A_exo1 |
PF01612 |
1.7e-35 |
2 |
ENSSSCP00060026175 |
HRDC |
PF00570 |
5.2e-12 |
3 |
ENSSSCP00060026177 |
DEAD |
PF00270 |
3.6e-16 |
1 |
ENSSSCP00060026177 |
DNA_pol_A_exo1 |
PF01612 |
1.7e-35 |
2 |
ENSSSCP00060026177 |
HRDC |
PF00570 |
5.5e-12 |
3 |
ENSSSCP00060026169 |
DEAD |
PF00270 |
3.6e-16 |
1 |
ENSSSCP00060026169 |
DNA_pol_A_exo1 |
PF01612 |
1.7e-35 |
2 |
ENSSSCP00060026169 |
HRDC |
PF00570 |
5.5e-12 |
3 |
ENSSSCP00060026188 |
DEAD |
PF00270 |
3.7e-16 |
1 |
ENSSSCP00060026188 |
DNA_pol_A_exo1 |
PF01612 |
1.7e-35 |
2 |
ENSSSCP00060026188 |
HRDC |
PF00570 |
5.6e-12 |
3 |
ENSSSCP00060026187 |
DEAD |
PF00270 |
5.5e-16 |
1 |
ENSSSCP00060026187 |
DNA_pol_A_exo1 |
PF01612 |
1.6e-35 |
2 |
ENSSSCP00060026187 |
HRDC |
PF00570 |
4.9e-12 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00060061098 |
5604 |
1461aa |
ENSSSCP00060026169 |
- |
ENSSSCT00060061103 |
5342 |
1364aa |
ENSSSCP00060026173 |
- |
ENSSSCT00060061108 |
6524 |
1447aa |
ENSSSCP00060026175 |
- |
ENSSSCT00060061113 |
6255 |
1453aa |
ENSSSCP00060026177 |
- |
ENSSSCT00060061122 |
5550 |
1403aa |
ENSSSCP00060026181 |
- |
ENSSSCT00060061125 |
5531 |
1342aa |
ENSSSCP00060026183 |
- |
ENSSSCT00060061133 |
6589 |
1424aa |
ENSSSCP00060026185 |
- |
ENSSSCT00060061136 |
5530 |
1403aa |
ENSSSCP00060026187 |
- |
ENSSSCT00060061141 |
4673 |
1466aa |
ENSSSCP00060026188 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060042887 | 44.376 | 27.1186 | sus_scrofa_jinhua | ENSSSCP00060026188 | 19.6453 | 12.0055 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060020343 | 35.4379 | 20.5703 | sus_scrofa_jinhua | ENSSSCP00060026188 | 23.7381 | 13.779 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060027404 | 31.3367 | 16.3623 | sus_scrofa_jinhua | ENSSSCP00060026188 | 29.2633 | 15.2797 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 95.5662 | 95.2251 | sus_scrofa_usmarc | ENSSSCP00070045237 | 99.6444 | 99.2888 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.7954 | 99.7271 | sus_scrofa | ENSSSCP00000016786 | 99.7954 | 99.7271 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 87.3124 | 78.1037 | equus_caballus | ENSECAP00000000296 | 88.6427 | 79.2936 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.6589 | 99.5907 | sus_scrofa_berkshire | ENSSSCP00065044276 | 99.6589 | 99.5907 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.6589 | 99.5907 | sus_scrofa_landrace | ENSSSCP00045008676 | 99.6589 | 99.5907 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 100 | 99.9318 | sus_scrofa_bamei | ENSSSCP00050000557 | 100 | 99.9318 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030047480 | 100 | 100 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 78.1719 | 76.3984 | sus_scrofa_tibetan | ENSSSCP00015001584 | 91.9743 | 89.8876 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005040299 | 100 | 100 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.9318 | 99.7954 | sus_scrofa_hampshire | ENSSSCP00035001238 | 99.9318 | 99.7954 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.9318 | 99.8636 | sus_scrofa_meishan | ENSSSCP00040021014 | 99.9318 | 99.8636 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 85.1978 | 76.1937 | bos_taurus | ENSBTAP00000028778 | 88.9601 | 79.5584 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.7954 | 99.7271 | sus_scrofa_pietrain | ENSSSCP00055002009 | 99.7954 | 99.7271 |
ENSSSCG00060045040 | sus_scrofa_jinhua | ENSSSCP00060026188 | 99.7271 | 99.6589 | sus_scrofa_largewhite | ENSSSCP00025030162 | 99.7271 | 99.6589 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |