RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00060038631	Gene ID		Accession	-
Symbol	KXD1	Alias	-	Full Name	NA
Status	Confidence	Length	11965 bases	Strand	Plus strand
Position	LUXY01056159.1 : 2472917 - 2484881	RNA binding domain	Ribosomal_L40e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00060022225	Ribosomal_L40e	PF01020	4.2e-32	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
KXD1-201	ENSSSCT00060052209	1140	257aa	ENSSSCP00060022210
KXD1-202	ENSSSCT00060052218	909	183aa	ENSSSCP00060022212
KXD1-203	ENSSSCT00060052240	1065	305aa	ENSSSCP00060022225
KXD1-205	ENSSSCT00060052252	3927	224aa	ENSSSCP00060022229
KXD1-204	ENSSSCT00060052263	2201	305aa	ENSSSCP00060022235

Gene Model

Click here to download ENSSSCG00060038631's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00060038631's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00060038631

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	72.459	69.5082	sus_scrofa_usmarc	ENSSSCP00070024397	79.2115	75.9857
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	84.2623	84.2623	sus_scrofa	ENSSSCP00000071799	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	54.4262	49.8361	equus_caballus	ENSECAP00000066073	68.3128	62.5514
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_berkshire	ENSSSCP00065012474	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	56.3934	55.7377	ovis_aries_rambouillet	ENSOARP00020005480	97.7273	96.5909
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_landrace	ENSSSCP00045031752	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	99.6721	sus_scrofa_bamei	ENSSSCP00050045346	100	99.6721
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	99.6721	sus_scrofa_rongchang	ENSSSCP00030038142	100	99.6721
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	99.6721	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_wuzhishan	ENSSSCP00005030440	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_hampshire	ENSSSCP00035032179	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_meishan	ENSSSCP00040034536	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	60.3279	58.3607	bos_taurus	ENSBTAP00000062097	90.1961	87.2549
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	56.3934	54.7541	bos_taurus	ENSBTAP00000071466	97.7273	94.8864
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_pietrain	ENSSSCP00055034499	100	100
ENSSSCG00060038631	sus_scrofa_jinhua	ENSSSCP00060022235	100	100	sus_scrofa_largewhite	ENSSSCP00025020866	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression