Description

Ensembl ID ENSSSCG00060032352 Gene ID Accession -
Symbol TRMT13 Alias - Full Name NA
Status Confidence Length 25091 bases Strand Plus strand
Position LUXY01026466.1 : 2097516 - 2122606 RNA binding domain TRM13 , zf-TRM13_CCCH , zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060018691 TRM13 PF05206 9.4e-93 1
ENSSSCP00060018691 zf-TRM13_CCCH PF11722 9.1e-13 2
ENSSSCP00060018691 zf-U11-48K PF05253 5.2e-09 3
ENSSSCP00060018690 TRM13 PF05206 1.1e-92 1
ENSSSCP00060018690 zf-TRM13_CCCH PF11722 9.6e-13 2
ENSSSCP00060018690 zf-U11-48K PF05253 5.5e-09 3
ENSSSCP00060018693 zf-TRM13_CCCH PF11722 6.3e-14 1
ENSSSCP00060018693 zf-U11-48K PF05253 9.3e-10 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TRMT13-202 ENSSSCT00060043809 3495 481aa ENSSSCP00060018690
TRMT13-203 ENSSSCT00060043812 3432 460aa ENSSSCP00060018691
TRMT13-201 ENSSSCT00060043820 422 109aa ENSSSCP00060018693

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060032352

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_usmarcENSSSCP0007001869710099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP00060018690100100sus_scrofaENSSSCP00000035073100100
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869096.673693.3472equus_caballusENSECAP0000006441690.291387.1845
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_berkshireENSSSCP0006501179310099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869096.673693.3472ovis_aries_rambouilletENSOARP0002000260796.673693.3472
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_landraceENSSSCP0004502140510099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_bameiENSSSCP0005001185110099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_rongchangENSSSCP0003000383810099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_tibetanENSSSCP0001501597710099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_wuzhishanENSSSCP0000500844410099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869010099.7921sus_scrofa_hampshireENSSSCP0003500584510099.7921
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869099.792199.5842sus_scrofa_meishanENSSSCP0004002071699.792199.5842
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP0006001869096.673693.1393bos_taurusENSBTAP0000002095596.673693.1393
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP00060018690100100sus_scrofa_pietrainENSSSCP00055010516100100
ENSSSCG00060032352sus_scrofa_jinhuaENSSSCP00060018690100100sus_scrofa_largewhiteENSSSCP00025005003100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression