RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSSSCG00060030781	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	434 bases	Strand	Plus strand
Position	LUXY01054955.1 : 83 - 516	RNA binding domain	SHS2_Rpb7-N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00060017661	SHS2_Rpb7-N	PF03876	2.8e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID

Gene Model

Click here to download ENSSSCG00060030781's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00060030781's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00060030781

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00060030781	sus_scrofa_jinhua	ENSSSCP00060017661	100	100	sus_scrofa_landrace	ENSSSCP00045041277	100	100
ENSSSCG00060030781	sus_scrofa_jinhua	ENSSSCP00060017661	100	100	sus_scrofa_rongchang	ENSSSCP00030006812	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression