RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060028500 | Gene ID |
|
Accession |
- |
Symbol |
PRPF8 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
33617 bases |
Strand |
Plus strand |
Position |
LUXY01007927.1 : 1131779 - 1165395 |
RNA binding domain |
PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060016401 |
PROCT |
PF08084 |
4.8e-52 |
1 |
ENSSSCP00060016401 |
PRP8_domainIV |
PF12134 |
4.4e-129 |
2 |
ENSSSCP00060016401 |
PRO8NT |
PF08082 |
2e-85 |
3 |
ENSSSCP00060016401 |
U6-snRNA_bdg |
PF10596 |
5.1e-89 |
4 |
ENSSSCP00060016401 |
PROCN |
PF08083 |
6.8e-234 |
5 |
ENSSSCP00060016401 |
RRM_4 |
PF10598 |
1e-47 |
6 |
ENSSSCP00060016401 |
U5_2-snRNA_bdg |
PF10597 |
9.9e-73 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
PRPF8-201 |
ENSSSCT00060038556 |
7291 |
2335aa |
ENSSSCP00060016401 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060028500 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070024166 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa | ENSSSCP00000018877 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | equus_caballus | ENSECAP00000018808 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065034617 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | ovis_aries_rambouillet | ENSOARP00020029535 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045028768 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050007806 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030039505 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015035916 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 99.1863 | 99.1863 | sus_scrofa_wuzhishan | ENSSSCP00005017312 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035032717 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040007929 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | bos_taurus | ENSBTAP00000043577 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 98.9722 | 98.9722 | sus_scrofa_pietrain | ENSSSCP00055037402 | 100 | 100 |
ENSSSCG00060028500 | sus_scrofa_jinhua | ENSSSCP00060016401 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025046189 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |