| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00060027448 | Gene ID |
|
Accession |
- |
| Symbol |
EEF1A |
Alias |
- |
Full Name |
Sus scrofa eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), mRNA. |
| Status |
Confidence |
Length |
4859 bases |
Strand |
Plus strand |
| Position |
LUXY01047730.1 : 386447 - 391305 |
RNA binding domain |
GTP_EFTU , GTP_EFTU_D3 , GTP_EFTU_D2 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00060015829 |
GTP_EFTU |
PF00009 |
8.2e-54 |
1 |
| ENSSSCP00060015829 |
GTP_EFTU_D3 |
PF03143 |
1.9e-21 |
2 |
| ENSSSCP00060015829 |
GTP_EFTU_D2 |
PF03144 |
8.1e-15 |
3 |
| ENSSSCP00060015851 |
GTP_EFTU |
PF00009 |
8.9e-54 |
1 |
| ENSSSCP00060015851 |
GTP_EFTU_D3 |
PF03143 |
2.4e-31 |
2 |
| ENSSSCP00060015851 |
GTP_EFTU_D2 |
PF03144 |
1.3e-14 |
3 |
| ENSSSCP00060015812 |
GTP_EFTU |
PF00009 |
9.4e-54 |
1 |
| ENSSSCP00060015812 |
GTP_EFTU_D3 |
PF03143 |
2.4e-31 |
2 |
| ENSSSCP00060015812 |
GTP_EFTU_D2 |
PF03144 |
8e-15 |
3 |
| ENSSSCP00060015820 |
GTP_EFTU |
PF00009 |
9.4e-54 |
1 |
| ENSSSCP00060015820 |
GTP_EFTU_D3 |
PF03143 |
2.4e-31 |
2 |
| ENSSSCP00060015820 |
GTP_EFTU_D2 |
PF03144 |
8e-15 |
3 |
| ENSSSCP00060015842 |
GTP_EFTU |
PF00009 |
9.4e-54 |
1 |
| ENSSSCP00060015842 |
GTP_EFTU_D3 |
PF03143 |
2.4e-31 |
2 |
| ENSSSCP00060015842 |
GTP_EFTU_D2 |
PF03144 |
8e-15 |
3 |
| ENSSSCP00060015818 |
GTP_EFTU |
PF00009 |
9.5e-54 |
1 |
| ENSSSCP00060015818 |
GTP_EFTU_D3 |
PF03143 |
3.7e-31 |
2 |
| ENSSSCP00060015818 |
GTP_EFTU_D2 |
PF03144 |
1.3e-14 |
3 |
| ENSSSCP00060015816 |
GTP_EFTU |
PF00009 |
4.8e-39 |
1 |
| ENSSSCP00060015816 |
GTP_EFTU_D3 |
PF03143 |
2.9e-31 |
2 |
| ENSSSCP00060015816 |
GTP_EFTU_D2 |
PF03144 |
5.6e-15 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| EEF1A-201 |
ENSSSCT00060037155 |
1817 |
462aa |
ENSSSCP00060015812 |
| EEF1A-202 |
ENSSSCT00060037177 |
1509 |
502aa |
ENSSSCP00060015816 |
| EEF1A-203 |
ENSSSCT00060037182 |
1750 |
464aa |
ENSSSCP00060015818 |
| EEF1A-204 |
ENSSSCT00060037185 |
1808 |
462aa |
ENSSSCP00060015820 |
| EEF1A-205 |
ENSSSCT00060037203 |
3007 |
428aa |
ENSSSCP00060015829 |
| EEF1A-206 |
ENSSSCT00060037222 |
2907 |
462aa |
ENSSSCP00060015842 |
| EEF1A-207 |
ENSSSCT00060037240 |
1353 |
450aa |
ENSSSCP00060015851 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060023870 | 72.7891 | 68.8775 | sus_scrofa_jinhua | ENSSSCP00060015816 | 85.259 | 80.6773 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060013416 | 40.0636 | 25.4372 | sus_scrofa_jinhua | ENSSSCP00060015816 | 50.1992 | 31.8725 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060009621 | 17.3969 | 8.76289 | sus_scrofa_jinhua | ENSSSCP00060015816 | 26.8924 | 13.5458 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060003952 | 33.5652 | 21.0435 | sus_scrofa_jinhua | ENSSSCP00060015816 | 38.4462 | 24.1036 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060025968 | 31.7073 | 14.6341 | sus_scrofa_jinhua | ENSSSCP00060015816 | 10.3586 | 4.78088 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060010947 | 30.0847 | 16.5254 | sus_scrofa_jinhua | ENSSSCP00060015816 | 28.2869 | 15.5378 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060044774 | 14.4033 | 7.81893 | sus_scrofa_jinhua | ENSSSCP00060015816 | 27.8884 | 15.1394 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060003485 | 14.0179 | 6.60714 | sus_scrofa_jinhua | ENSSSCP00060015816 | 31.2749 | 14.741 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060047341 | 11.9184 | 7.18367 | sus_scrofa_jinhua | ENSSSCP00060015816 | 29.0837 | 17.5299 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060024126 | 36.7347 | 23.7609 | sus_scrofa_jinhua | ENSSSCP00060015816 | 50.1992 | 32.4701 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060004553 | 17.613 | 9.73349 | sus_scrofa_jinhua | ENSSSCP00060015816 | 30.2789 | 16.7331 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060024283 | 26.1584 | 14.9477 | sus_scrofa_jinhua | ENSSSCP00060015816 | 34.8606 | 19.9203 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060032358 | 21.6741 | 13.154 | sus_scrofa_jinhua | ENSSSCP00060015816 | 28.8845 | 17.5299 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060018472 | 17.4644 | 10.2199 | sus_scrofa_jinhua | ENSSSCP00060015816 | 26.8924 | 15.7371 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060030346 | 88.9371 | 80.9111 | sus_scrofa_jinhua | ENSSSCP00060015816 | 81.6733 | 74.3028 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060039401 | 89.2377 | 83.1839 | sus_scrofa_jinhua | ENSSSCP00060015816 | 79.2829 | 73.9044 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060046267 | 23.5294 | 13.3127 | sus_scrofa_jinhua | ENSSSCP00060015816 | 30.2789 | 17.1315 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060017159 | 89.2361 | 85.4167 | sus_scrofa_jinhua | ENSSSCP00060015816 | 51.1952 | 49.004 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060016979 | 27.907 | 15.6146 | sus_scrofa_jinhua | ENSSSCP00060015816 | 33.4661 | 18.7251 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060010377 | 39.2188 | 25.4688 | sus_scrofa_jinhua | ENSSSCP00060015816 | 50 | 32.4701 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060008920 | 17.6393 | 9.54907 | sus_scrofa_jinhua | ENSSSCP00060015816 | 26.494 | 14.3426 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070021612 | 100 | 100 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 98.8048 | 98.6056 | sus_scrofa | ENSSSCP00000035282 | 99.002 | 98.8024 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 82.6693 | 81.0757 | equus_caballus | ENSECAP00000089732 | 94.9657 | 93.135 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 86.8526 | 85.8566 | equus_caballus | ENSECAP00000000791 | 93.9655 | 92.8879 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 88.247 | 87.251 | equus_caballus | ENSECAP00000076067 | 95.8874 | 94.8052 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 88.0478 | 87.0518 | equus_caballus | ENSECAP00000018148 | 96.2963 | 95.207 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065025853 | 100 | 100 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 83.6653 | 82.6693 | ovis_aries_rambouillet | ENSOARP00020009810 | 96.1098 | 94.9657 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 82.6693 | 81.0757 | ovis_aries_rambouillet | ENSOARP00020029993 | 82.1782 | 80.5941 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 81.8725 | 80.0797 | ovis_aries_rambouillet | ENSOARP00020031507 | 94.0503 | 91.9908 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 79.0837 | 76.2948 | ovis_aries_rambouillet | ENSOARP00020027688 | 94.5238 | 91.1905 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 88.6454 | 87.6494 | ovis_aries_rambouillet | ENSOARP00020026234 | 96.3203 | 95.2381 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 80.2789 | 78.4861 | ovis_aries_rambouillet | ENSOARP00020026740 | 93.5035 | 91.4153 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 8.96414 | 6.77291 | ovis_aries_rambouillet | ENSOARP00020026659 | 61.6438 | 46.5753 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 99.8008 | 99.8008 | sus_scrofa_landrace | ENSSSCP00045036437 | 99.8008 | 99.8008 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 97.6096 | 97.2112 | sus_scrofa_bamei | ENSSSCP00050005711 | 98.9899 | 98.5859 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 97.6096 | 97.2112 | sus_scrofa_rongchang | ENSSSCP00030039988 | 98.9899 | 98.5859 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 88.6454 | 87.6494 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.2381 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 97.6096 | 97.4104 | sus_scrofa_wuzhishan | ENSSSCP00005006890 | 97.0297 | 96.8317 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035026737 | 100 | 100 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 97.6096 | 97.4104 | sus_scrofa_meishan | ENSSSCP00040039346 | 98.9899 | 98.7879 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 9.76096 | 7.37052 | bos_taurus | ENSBTAP00000073267 | 64.4737 | 48.6842 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 9.16335 | 6.97211 | bos_taurus | ENSBTAP00000071921 | 62.1622 | 47.2973 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 9.16335 | 6.97211 | bos_taurus | ENSBTAP00000056656 | 62.1622 | 47.2973 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 83.0677 | 81.6733 | bos_taurus | ENSBTAP00000045490 | 94.7727 | 93.1818 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 88.6454 | 87.6494 | bos_taurus | ENSBTAP00000061151 | 96.3203 | 95.2381 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 99.6016 | 99.4024 | sus_scrofa_pietrain | ENSSSCP00055018811 | 99.6016 | 99.4024 |
| ENSSSCG00060027448 | sus_scrofa_jinhua | ENSSSCP00060015816 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025015572 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
