RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060023741 | Gene ID |
|
Accession |
- |
Symbol |
GTSF1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
18936 bases |
Strand |
Minus strand |
Position |
LUXY01063798.1 : 1820719 - 1839654 |
RNA binding domain |
zf-U11-48K |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060013833 |
zf-U11-48K |
PF05253 |
1e-20 |
1 |
ENSSSCP00060013833 |
zf-U11-48K |
PF05253 |
1e-20 |
2 |
ENSSSCP00060013831 |
zf-U11-48K |
PF05253 |
1.1e-20 |
1 |
ENSSSCP00060013831 |
zf-U11-48K |
PF05253 |
1.1e-20 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
GTSF1-201 |
ENSSSCT00060032235 |
716 |
167aa |
ENSSSCP00060013831 |
GTSF1-202 |
ENSSSCT00060032242 |
859 |
164aa |
ENSSSCP00060013833 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013901 | 48.2143 | 30.3571 | sus_scrofa_jinhua | ENSSSCP00060013831 | 32.3353 | 20.3593 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060020894 | 16.3077 | 6.76923 | sus_scrofa_jinhua | ENSSSCP00060013831 | 31.7365 | 13.1737 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060005713 | 41.6667 | 22.619 | sus_scrofa_jinhua | ENSSSCP00060013831 | 41.9162 | 22.7545 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070051254 | 100 | 100 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 100 | 100 | sus_scrofa | ENSSSCP00000025386 | 100 | 100 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 96.4072 | 94.6108 | equus_caballus | ENSECAP00000059096 | 73.1818 | 71.8182 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 99.4012 | 97.006 | ovis_aries_rambouillet | ENSOARP00020020817 | 99.4012 | 97.006 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050000334 | 100 | 100 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015003724 | 100 | 100 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005016563 | 100 | 100 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 99.4012 | 96.4072 | bos_taurus | ENSBTAP00000044649 | 99.4012 | 96.4072 |
ENSSSCG00060023741 | sus_scrofa_jinhua | ENSSSCP00060013831 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055025405 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |