Description

Ensembl ID ENSSSCG00060023741 Gene ID Accession -
Symbol GTSF1 Alias - Full Name NA
Status Confidence Length 18936 bases Strand Minus strand
Position LUXY01063798.1 : 1820719 - 1839654 RNA binding domain zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060013833 zf-U11-48K PF05253 1e-20 1
ENSSSCP00060013833 zf-U11-48K PF05253 1e-20 2
ENSSSCP00060013831 zf-U11-48K PF05253 1.1e-20 1
ENSSSCP00060013831 zf-U11-48K PF05253 1.1e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
GTSF1-201 ENSSSCT00060032235 716 167aa ENSSSCP00060013831
GTSF1-202 ENSSSCT00060032242 859 164aa ENSSSCP00060013833

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP0006001390148.214330.3571sus_scrofa_jinhuaENSSSCP0006001383132.335320.3593
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP0006002089416.30776.76923sus_scrofa_jinhuaENSSSCP0006001383131.736513.1737
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP0006000571341.666722.619sus_scrofa_jinhuaENSSSCP0006001383141.916222.7545

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP00060013831100100sus_scrofa_usmarcENSSSCP00070051254100100
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP00060013831100100sus_scrofaENSSSCP00000025386100100
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP0006001383196.407294.6108equus_caballusENSECAP0000005909673.181871.8182
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP0006001383199.401297.006ovis_aries_rambouilletENSOARP0002002081799.401297.006
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP00060013831100100sus_scrofa_bameiENSSSCP00050000334100100
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP00060013831100100sus_scrofa_tibetanENSSSCP00015003724100100
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP00060013831100100sus_scrofa_wuzhishanENSSSCP00005016563100100
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP0006001383199.401296.4072bos_taurusENSBTAP0000004464999.401296.4072
ENSSSCG00060023741sus_scrofa_jinhuaENSSSCP00060013831100100sus_scrofa_pietrainENSSSCP00055025405100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression