Description

Ensembl ID ENSSSCG00060023022 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2554 bases Strand Plus strand
Position LUXY01051646.1 : 6127 - 8680 RNA binding domain GTP_EFTU , PAM2 , GTP_EFTU_D3 , GTP_EFTU_D2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060013416 GTP_EFTU PF00009 4.2e-45 1
ENSSSCP00060013416 PAM2 PF07145 2.7e-06 2
ENSSSCP00060013416 GTP_EFTU_D3 PF03143 4.1e-24 3
ENSSSCP00060013416 GTP_EFTU_D2 PF03144 2.3e-07 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00060031251 2448 629aa ENSSSCP00060013416

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006000962115.59288.37629sus_scrofa_jinhuaENSSSCP0006001341619.236910.3339
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006000395234.956521.3913sus_scrofa_jinhuaENSSSCP0006001341631.955519.5548
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006002596829.268312.8049sus_scrofa_jinhuaENSSSCP000600134167.631163.33863
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001094731.355914.8305sus_scrofa_jinhuaENSSSCP0006001341623.529411.1288
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006004477416.97539.0535sus_scrofa_jinhuaENSSSCP0006001341626.232113.9905
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006000348514.28575.80357sus_scrofa_jinhuaENSSSCP0006001341625.437210.3339
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006004734117.14299.38776sus_scrofa_jinhuaENSSSCP0006001341633.386318.283
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006002412647.376130.758sus_scrofa_jinhuaENSSSCP0006001341651.669333.5453
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006000455317.84478.57474sus_scrofa_jinhuaENSSSCP0006001341624.483311.7647
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006002428328.998516.293sus_scrofa_jinhuaENSSSCP0006001341630.842617.3291
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001581650.199231.8725sus_scrofa_jinhuaENSSSCP0006001341640.063625.4372
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006002387048.129330.4422sus_scrofa_jinhuaENSSSCP0006001341644.992128.4579
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006003235821.225712.1076sus_scrofa_jinhuaENSSSCP0006001341622.575512.8776
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001847216.42958.66753sus_scrofa_jinhuaENSSSCP0006001341620.190810.6518
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006003034655.748435.141sus_scrofa_jinhuaENSSSCP0006001341640.858525.7552
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006003940156.950735.8744sus_scrofa_jinhuaENSSSCP0006001341640.381625.4372
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006004626724.148612.5387sus_scrofa_jinhuaENSSSCP0006001341624.801312.8776
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001715942.013925.3472sus_scrofa_jinhuaENSSSCP0006001341619.236911.6057
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001697932.724318.6047sus_scrofa_jinhuaENSSSCP0006001341631.319617.806
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001037789.37586.875sus_scrofa_jinhuaENSSSCP0006001341690.93888.3943
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006000892023.342212.2016sus_scrofa_jinhuaENSSSCP0006001341627.980914.6264

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001341698.092297.6153sus_scrofa_usmarcENSSSCP0007000746282.266781.8667
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofaENSSSCP0000001310899.525399.5253
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001341696.502494.5946equus_caballusENSECAP0000005382296.810294.8963
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_berkshireENSSSCP0006503993899.525399.5253
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001341697.615396.5024ovis_aries_rambouilletENSOARP0002001540497.151996.0443
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_landraceENSSSCP0004503582699.525399.5253
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_bameiENSSSCP00050039713100100
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_rongchangENSSSCP00030009488100100
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_tibetanENSSSCP00015027570100100
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001341679.173379.1733sus_scrofa_wuzhishanENSSSCP00005015562100100
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_hampshireENSSSCP0003504359999.525399.5253
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_meishanENSSSCP00040041829100100
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP0006001341697.297396.5024bos_taurusENSBTAP0000007355796.988996.1965
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_pietrainENSSSCP0005503437599.525399.5253
ENSSSCG00060023022sus_scrofa_jinhuaENSSSCP00060013416100100sus_scrofa_largewhiteENSSSCP0002500173299.525399.5253

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression