RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060023022 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
2554 bases |
Strand |
Plus strand |
Position |
LUXY01051646.1 : 6127 - 8680 |
RNA binding domain |
GTP_EFTU , PAM2 , GTP_EFTU_D3 , GTP_EFTU_D2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060013416 |
GTP_EFTU |
PF00009 |
4.2e-45 |
1 |
ENSSSCP00060013416 |
PAM2 |
PF07145 |
2.7e-06 |
2 |
ENSSSCP00060013416 |
GTP_EFTU_D3 |
PF03143 |
4.1e-24 |
3 |
ENSSSCP00060013416 |
GTP_EFTU_D2 |
PF03144 |
2.3e-07 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00060031251 |
2448 |
629aa |
ENSSSCP00060013416 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060009621 | 15.5928 | 8.37629 | sus_scrofa_jinhua | ENSSSCP00060013416 | 19.2369 | 10.3339 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060003952 | 34.9565 | 21.3913 | sus_scrofa_jinhua | ENSSSCP00060013416 | 31.9555 | 19.5548 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060025968 | 29.2683 | 12.8049 | sus_scrofa_jinhua | ENSSSCP00060013416 | 7.63116 | 3.33863 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060010947 | 31.3559 | 14.8305 | sus_scrofa_jinhua | ENSSSCP00060013416 | 23.5294 | 11.1288 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060044774 | 16.9753 | 9.0535 | sus_scrofa_jinhua | ENSSSCP00060013416 | 26.2321 | 13.9905 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060003485 | 14.2857 | 5.80357 | sus_scrofa_jinhua | ENSSSCP00060013416 | 25.4372 | 10.3339 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060047341 | 17.1429 | 9.38776 | sus_scrofa_jinhua | ENSSSCP00060013416 | 33.3863 | 18.283 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060024126 | 47.3761 | 30.758 | sus_scrofa_jinhua | ENSSSCP00060013416 | 51.6693 | 33.5453 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060004553 | 17.8447 | 8.57474 | sus_scrofa_jinhua | ENSSSCP00060013416 | 24.4833 | 11.7647 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060024283 | 28.9985 | 16.293 | sus_scrofa_jinhua | ENSSSCP00060013416 | 30.8426 | 17.3291 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060015816 | 50.1992 | 31.8725 | sus_scrofa_jinhua | ENSSSCP00060013416 | 40.0636 | 25.4372 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060023870 | 48.1293 | 30.4422 | sus_scrofa_jinhua | ENSSSCP00060013416 | 44.9921 | 28.4579 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060032358 | 21.2257 | 12.1076 | sus_scrofa_jinhua | ENSSSCP00060013416 | 22.5755 | 12.8776 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060018472 | 16.4295 | 8.66753 | sus_scrofa_jinhua | ENSSSCP00060013416 | 20.1908 | 10.6518 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060030346 | 55.7484 | 35.141 | sus_scrofa_jinhua | ENSSSCP00060013416 | 40.8585 | 25.7552 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060039401 | 56.9507 | 35.8744 | sus_scrofa_jinhua | ENSSSCP00060013416 | 40.3816 | 25.4372 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060046267 | 24.1486 | 12.5387 | sus_scrofa_jinhua | ENSSSCP00060013416 | 24.8013 | 12.8776 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060017159 | 42.0139 | 25.3472 | sus_scrofa_jinhua | ENSSSCP00060013416 | 19.2369 | 11.6057 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060016979 | 32.7243 | 18.6047 | sus_scrofa_jinhua | ENSSSCP00060013416 | 31.3196 | 17.806 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060010377 | 89.375 | 86.875 | sus_scrofa_jinhua | ENSSSCP00060013416 | 90.938 | 88.3943 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060008920 | 23.3422 | 12.2016 | sus_scrofa_jinhua | ENSSSCP00060013416 | 27.9809 | 14.6264 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 98.0922 | 97.6153 | sus_scrofa_usmarc | ENSSSCP00070007462 | 82.2667 | 81.8667 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa | ENSSSCP00000013108 | 99.5253 | 99.5253 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 96.5024 | 94.5946 | equus_caballus | ENSECAP00000053822 | 96.8102 | 94.8963 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065039938 | 99.5253 | 99.5253 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 97.6153 | 96.5024 | ovis_aries_rambouillet | ENSOARP00020015404 | 97.1519 | 96.0443 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045035826 | 99.5253 | 99.5253 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050039713 | 100 | 100 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030009488 | 100 | 100 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015027570 | 100 | 100 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 79.1733 | 79.1733 | sus_scrofa_wuzhishan | ENSSSCP00005015562 | 100 | 100 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035043599 | 99.5253 | 99.5253 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040041829 | 100 | 100 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 97.2973 | 96.5024 | bos_taurus | ENSBTAP00000073557 | 96.9889 | 96.1965 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055034375 | 99.5253 | 99.5253 |
ENSSSCG00060023022 | sus_scrofa_jinhua | ENSSSCP00060013416 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025001732 | 99.5253 | 99.5253 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |