Description

Ensembl ID ENSSSCG00060017229 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 64311 bases Strand Plus strand
Position LUXY01016605.1 : 2128657 - 2192967 RNA binding domain GTP_EFTU , EFG_IV , MMR_HSR1 , GTP_EFTU_D2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00060009621 GTP_EFTU PF00009 6.4e-67 1
ENSSSCP00060009621 EFG_IV PF03764 4.1e-12 2
ENSSSCP00060009621 MMR_HSR1 PF01926 0.00016 3
ENSSSCP00060009621 GTP_EFTU_D2 PF03144 2.5e-07 4
ENSSSCP00060009619 GTP_EFTU PF00009 2.7e-51 1
ENSSSCP00060009619 EFG_IV PF03764 3.6e-12 2
ENSSSCP00060009619 GTP_EFTU_D2 PF03144 2.4e-07 3
ENSSSCP00060009602 GTP_EFTU PF00009 4.5e-42 1
ENSSSCP00060009602 GTP_EFTU PF00009 4.5e-42 2
ENSSSCP00060009602 EFG_IV PF03764 3.8e-12 3
ENSSSCP00060009602 GTP_EFTU_D2 PF03144 2.4e-07 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00060023040 4233 734aa ENSSSCP00060009602
- ENSSSCT00060023085 3843 724aa ENSSSCP00060009619
- ENSSSCT00060023090 4279 776aa ENSSSCP00060009621

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001341619.236910.3339sus_scrofa_jinhuaENSSSCP0006000962115.59288.37629
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000395223.478313.0435sus_scrofa_jinhuaENSSSCP0006000962117.39699.66495
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006002596828.048814.0244sus_scrofa_jinhuaENSSSCP000600096215.927832.96392
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001094726.483113.5593sus_scrofa_jinhuaENSSSCP0006000962116.10828.24742
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006004477425.82313.8889sus_scrofa_jinhuaENSSSCP0006000962132.345417.3969
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000348523.839312.7679sus_scrofa_jinhuaENSSSCP0006000962134.407218.4278
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006004734114.36736.44898sus_scrofa_jinhuaENSSSCP0006000962122.680410.1804
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006002412622.44912.2449sus_scrofa_jinhuaENSSSCP0006000962119.845410.8247
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000455329.779816.9177sus_scrofa_jinhuaENSSSCP0006000962133.118618.8144
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006002428317.93728.3707sus_scrofa_jinhuaENSSSCP0006000962115.46397.2165
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001581626.892413.5458sus_scrofa_jinhuaENSSSCP0006000962117.39698.76289
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006002387023.639512.7551sus_scrofa_jinhuaENSSSCP0006000962117.91249.66495
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006003235831.689117.0404sus_scrofa_jinhuaENSSSCP0006000962127.319614.6907
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001847247.994832.9884sus_scrofa_jinhuaENSSSCP0006000962147.809332.8608
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006003034630.585716.9197sus_scrofa_jinhuaENSSSCP0006000962118.170110.0515
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006003940128.251115.0224sus_scrofa_jinhuaENSSSCP0006000962116.23718.63402
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006004626726.006213.0031sus_scrofa_jinhuaENSSSCP0006000962121.649510.8247
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001715924.305610.0694sus_scrofa_jinhuaENSSSCP000600096219.020623.73711
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001697918.43858.47176sus_scrofa_jinhuaENSSSCP0006000962114.30416.57217
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006001037719.218810.625sus_scrofa_jinhuaENSSSCP0006000962115.85058.76289
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000892024.403212.2016sus_scrofa_jinhuaENSSSCP0006000962123.711311.8557

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofa_usmarcENSSSCP0007000459160.975660.8969
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofaENSSSCP0000004068399.104998.977
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962197.422791.7526equus_caballusENSECAP0000004728491.414786.0943
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofa_berkshireENSSSCP0006502203799.871199.7423
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962196.649592.9124ovis_aries_rambouilletENSOARP0002002691096.525192.7928
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofa_landraceENSSSCP0004500250699.871199.7423
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.8711sus_scrofa_rongchangENSSSCP0003004300299.871199.8711
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.8711sus_scrofa_wuzhishanENSSSCP0000500957599.871199.8711
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofa_meishanENSSSCP0004004418699.871199.7423
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962196.778492.5258bos_taurusENSBTAP0000004899996.653892.4067
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofa_pietrainENSSSCP0005500139599.871199.7423
ENSSSCG00060017229sus_scrofa_jinhuaENSSSCP0006000962199.871199.7423sus_scrofa_largewhiteENSSSCP0002500787999.104998.977

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression