RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00060017229 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
64311 bases |
Strand |
Plus strand |
Position |
LUXY01016605.1 : 2128657 - 2192967 |
RNA binding domain |
GTP_EFTU , EFG_IV , MMR_HSR1 , GTP_EFTU_D2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00060009621 |
GTP_EFTU |
PF00009 |
6.4e-67 |
1 |
ENSSSCP00060009621 |
EFG_IV |
PF03764 |
4.1e-12 |
2 |
ENSSSCP00060009621 |
MMR_HSR1 |
PF01926 |
0.00016 |
3 |
ENSSSCP00060009621 |
GTP_EFTU_D2 |
PF03144 |
2.5e-07 |
4 |
ENSSSCP00060009619 |
GTP_EFTU |
PF00009 |
2.7e-51 |
1 |
ENSSSCP00060009619 |
EFG_IV |
PF03764 |
3.6e-12 |
2 |
ENSSSCP00060009619 |
GTP_EFTU_D2 |
PF03144 |
2.4e-07 |
3 |
ENSSSCP00060009602 |
GTP_EFTU |
PF00009 |
4.5e-42 |
1 |
ENSSSCP00060009602 |
GTP_EFTU |
PF00009 |
4.5e-42 |
2 |
ENSSSCP00060009602 |
EFG_IV |
PF03764 |
3.8e-12 |
3 |
ENSSSCP00060009602 |
GTP_EFTU_D2 |
PF03144 |
2.4e-07 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00060023040 |
4233 |
734aa |
ENSSSCP00060009602 |
- |
ENSSSCT00060023085 |
3843 |
724aa |
ENSSSCP00060009619 |
- |
ENSSSCT00060023090 |
4279 |
776aa |
ENSSSCP00060009621 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060013416 | 19.2369 | 10.3339 | sus_scrofa_jinhua | ENSSSCP00060009621 | 15.5928 | 8.37629 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060003952 | 23.4783 | 13.0435 | sus_scrofa_jinhua | ENSSSCP00060009621 | 17.3969 | 9.66495 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060025968 | 28.0488 | 14.0244 | sus_scrofa_jinhua | ENSSSCP00060009621 | 5.92783 | 2.96392 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060010947 | 26.4831 | 13.5593 | sus_scrofa_jinhua | ENSSSCP00060009621 | 16.1082 | 8.24742 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060044774 | 25.823 | 13.8889 | sus_scrofa_jinhua | ENSSSCP00060009621 | 32.3454 | 17.3969 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060003485 | 23.8393 | 12.7679 | sus_scrofa_jinhua | ENSSSCP00060009621 | 34.4072 | 18.4278 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060047341 | 14.3673 | 6.44898 | sus_scrofa_jinhua | ENSSSCP00060009621 | 22.6804 | 10.1804 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060024126 | 22.449 | 12.2449 | sus_scrofa_jinhua | ENSSSCP00060009621 | 19.8454 | 10.8247 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060004553 | 29.7798 | 16.9177 | sus_scrofa_jinhua | ENSSSCP00060009621 | 33.1186 | 18.8144 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060024283 | 17.9372 | 8.3707 | sus_scrofa_jinhua | ENSSSCP00060009621 | 15.4639 | 7.2165 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060015816 | 26.8924 | 13.5458 | sus_scrofa_jinhua | ENSSSCP00060009621 | 17.3969 | 8.76289 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060023870 | 23.6395 | 12.7551 | sus_scrofa_jinhua | ENSSSCP00060009621 | 17.9124 | 9.66495 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060032358 | 31.6891 | 17.0404 | sus_scrofa_jinhua | ENSSSCP00060009621 | 27.3196 | 14.6907 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060018472 | 47.9948 | 32.9884 | sus_scrofa_jinhua | ENSSSCP00060009621 | 47.8093 | 32.8608 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060030346 | 30.5857 | 16.9197 | sus_scrofa_jinhua | ENSSSCP00060009621 | 18.1701 | 10.0515 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060039401 | 28.2511 | 15.0224 | sus_scrofa_jinhua | ENSSSCP00060009621 | 16.2371 | 8.63402 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060046267 | 26.0062 | 13.0031 | sus_scrofa_jinhua | ENSSSCP00060009621 | 21.6495 | 10.8247 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060017159 | 24.3056 | 10.0694 | sus_scrofa_jinhua | ENSSSCP00060009621 | 9.02062 | 3.73711 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060016979 | 18.4385 | 8.47176 | sus_scrofa_jinhua | ENSSSCP00060009621 | 14.3041 | 6.57217 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060010377 | 19.2188 | 10.625 | sus_scrofa_jinhua | ENSSSCP00060009621 | 15.8505 | 8.76289 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060008920 | 24.4032 | 12.2016 | sus_scrofa_jinhua | ENSSSCP00060009621 | 23.7113 | 11.8557 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa_usmarc | ENSSSCP00070004591 | 60.9756 | 60.8969 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa | ENSSSCP00000040683 | 99.1049 | 98.977 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 97.4227 | 91.7526 | equus_caballus | ENSECAP00000047284 | 91.4147 | 86.0943 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa_berkshire | ENSSSCP00065022037 | 99.8711 | 99.7423 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 96.6495 | 92.9124 | ovis_aries_rambouillet | ENSOARP00020026910 | 96.5251 | 92.7928 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa_landrace | ENSSSCP00045002506 | 99.8711 | 99.7423 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.8711 | sus_scrofa_rongchang | ENSSSCP00030043002 | 99.8711 | 99.8711 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.8711 | sus_scrofa_wuzhishan | ENSSSCP00005009575 | 99.8711 | 99.8711 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa_meishan | ENSSSCP00040044186 | 99.8711 | 99.7423 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 96.7784 | 92.5258 | bos_taurus | ENSBTAP00000048999 | 96.6538 | 92.4067 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa_pietrain | ENSSSCP00055001395 | 99.8711 | 99.7423 |
ENSSSCG00060017229 | sus_scrofa_jinhua | ENSSSCP00060009621 | 99.8711 | 99.7423 | sus_scrofa_largewhite | ENSSSCP00025007879 | 99.1049 | 98.977 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |