Description

Ensembl ID ENSSSCG00055029491 Gene ID Accession -
Symbol POLR3A Alias - Full Name NA
Status Confidence Length 61545 bases Strand Minus strand
Position LUXU01084927.1 : 1242319 - 1303863 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055047042 RNA_pol_Rpb1_4 PF05000 7.3e-32 1
ENSSSCP00055047042 RNA_pol_Rpb1_1 PF04997 2.5e-60 2
ENSSSCP00055047042 RNA_pol_Rpb1_5 PF04998 6.3e-89 3
ENSSSCP00055047042 RNA_pol_Rpb1_2 PF00623 6.9e-75 4
ENSSSCP00055047042 RNA_pol_Rpb1_3 PF04983 7.5e-42 5
ENSSSCP00055047014 RNA_pol_Rpb1_4 PF05000 7.4e-32 1
ENSSSCP00055047014 RNA_pol_Rpb1_1 PF04997 2.1e-96 2
ENSSSCP00055047014 RNA_pol_Rpb1_5 PF04998 6.7e-55 3
ENSSSCP00055047014 RNA_pol_Rpb1_5 PF04998 6.7e-55 4
ENSSSCP00055047014 RNA_pol_Rpb1_2 PF00623 3.9e-47 5
ENSSSCP00055047014 RNA_pol_Rpb1_2 PF00623 3.9e-47 6
ENSSSCP00055047014 RNA_pol_Rpb1_3 PF04983 6.7e-42 7
ENSSSCP00055046879 RNA_pol_Rpb1_4 PF05000 8.1e-32 1
ENSSSCP00055046879 RNA_pol_Rpb1_1 PF04997 4.3e-96 2
ENSSSCP00055046879 RNA_pol_Rpb1_5 PF04998 8.7e-89 3
ENSSSCP00055046879 RNA_pol_Rpb1_2 PF00623 7.7e-75 4
ENSSSCP00055046879 RNA_pol_Rpb1_3 PF04983 8.5e-42 5
ENSSSCP00055046946 RNA_pol_Rpb1_4 PF05000 8.4e-32 1
ENSSSCP00055046946 RNA_pol_Rpb1_1 PF04997 2.5e-96 2
ENSSSCP00055046946 RNA_pol_Rpb1_5 PF04998 7.3e-89 3
ENSSSCP00055046946 RNA_pol_Rpb1_2 PF00623 7.7e-75 4
ENSSSCP00055046946 RNA_pol_Rpb1_3 PF04983 9.1e-42 5
ENSSSCP00055046971 RNA_pol_Rpb1_4 PF05000 8.8e-32 1
ENSSSCP00055046971 RNA_pol_Rpb1_1 PF04997 2.2e-96 2
ENSSSCP00055046971 RNA_pol_Rpb1_5 PF04998 2.9e-62 3
ENSSSCP00055046971 RNA_pol_Rpb1_2 PF00623 7.2e-75 4
ENSSSCP00055046971 RNA_pol_Rpb1_3 PF04983 8e-42 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
POLR3A-201 ENSSSCT00055058574 6292 1402aa ENSSSCP00055046879
POLR3A-203 ENSSSCT00055058648 4653 1390aa ENSSSCP00055046946
POLR3A-204 ENSSSCT00055058674 4356 1291aa ENSSSCP00055046971
POLR3A-205 ENSSSCT00055058719 4338 1285aa ENSSSCP00055047014
POLR3A-202 ENSSSCT00055058751 4787 1284aa ENSSSCP00055047042

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005503115238.872724.3463sus_scrofa_pietrainENSSSCP0005504687947.717529.8859
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005502123338.071124.7208sus_scrofa_pietrainENSSSCP0005504687953.49534.7361

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.144199.1441sus_scrofa_largewhiteENSSSCP00025039892100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.144199.1441sus_scrofaENSSSCP00000011013100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.500798.3595equus_caballusENSECAP0000004959799.500798.3595
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP00055046879100100sus_scrofa_berkshireENSSSCP00065026123100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687983.452282.525sus_scrofa_tibetanENSSSCP0001500336696.455195.3833
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.144199.1441sus_scrofa_usmarcENSSSCP00070002709100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687998.858897.7175ovis_aries_rambouilletENSOARP0002003422599.712298.5611
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687998.858898.0742bos_taurusENSBTAP0000001763899.712298.9209
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687998.716198.7161sus_scrofa_wuzhishanENSSSCP0000503283898.716198.7161
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP00055046879100100sus_scrofa_meishanENSSSCP00040017614100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.144199.1441sus_scrofa_bameiENSSSCP00050031986100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.144199.1441sus_scrofa_jinhuaENSSSCP00060039053100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687910099.9287sus_scrofa_landraceENSSSCP0004503517410099.9287
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP0005504687999.144199.1441sus_scrofa_hampshireENSSSCP00035003424100100
ENSSSCG00055029491sus_scrofa_pietrainENSSSCP00055046879100100sus_scrofa_rongchangENSSSCP00030012336100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression