RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00055025886	Gene ID		Accession	-
Symbol	PYURF	Alias	-	Full Name	NA
Status	Confidence	Length	3175 bases	Strand	Minus strand
Position	LUXU01042914.1 : 196209 - 199383	RNA binding domain	Trm112p
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00055040919	Trm112p	PF03966	4.9e-08	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
PYURF-201	ENSSSCT00055051179	2053	114aa	ENSSSCP00055040919

Gene Model

Click here to download ENSSSCG00055025886's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00055025886's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055025886

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_largewhite	ENSSSCP00025045912	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_berkshire	ENSSSCP00065039781	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_tibetan	ENSSSCP00015032360	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	99.1228	99.1228	sus_scrofa_usmarc	ENSSSCP00070024531	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	90.3509	84.2105	ovis_aries_rambouillet	ENSOARP00020008394	88.7931	82.7586
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	91.2281	85.9649	ovis_aries_rambouillet	ENSOARP00020030374	91.2281	85.9649
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	90.3509	85.9649	bos_taurus	ENSBTAP00000027369	90.3509	85.9649
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_meishan	ENSSSCP00040034371	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_bamei	ENSSSCP00050045454	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_landrace	ENSSSCP00045010521	100	100
ENSSSCG00055025886	sus_scrofa_pietrain	ENSSSCP00055040919	100	100	sus_scrofa_hampshire	ENSSSCP00035017157	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression